SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene2551

Length: 273 nt

UniGene Fasta

>biog3_v1.0_unigene2551
ACGATAAGTTATAGAGATGCAGATAAAAAGTATCCGAATGTGACAATGAACCTCCCATATGTTTGCATGGACCTTGTGTATCAATACTCTTTATTAGTGGATGGTTTTGGTATCAAGCCTCAGAGAGAAGTAACATTTGTAGATGGGTTAAAATACAAGGATTACCAGGTTGATGTTTCGTGGGCTGTTGGTGGTGCTATTGATCTTCTTACCTTAGCTACTAAAAGTATGTTGGTAGCCTACTAAATATGCTATCTTGCTAGCAACATTTTA

Ace file of the UniGene biog3_v1.0_unigene2551

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene10124	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	Apyrase n=1 Tax=Vigna unguiculata subsp. cylindrica RepID=Q9SPM7_DOLBI	-	-	41%
FL-Next	sp=Apyrase; Solanum tuberosum (Potato).	-	-	50%
Blast2go	apyrase-like protein	-	-	66%

Source	ECs	Term	Type	e value	Identity
Blast2go	Nucleoside-diphosphatase.	EC:3.6.1.6	-	0.0	66%

Source	KEGGs	Term	Type	Identity
Blast2go	Purine metabolism	00230		66%
Blast2go	Pyrimidine metabolism	00240		66%
Blast2go	Adenosinetriphosphatase.	EC:3.6.1.3	-	66%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Purine metabolism	00230		0.0	66%

Source	GOs	Term	Type	Identity
Blast2go	pollen germination	GO:0009846	Biological Process	66%
Blast2go	calmodulin binding	GO:0005516	Molecular Function	66%
Blast2go	nucleoside-diphosphatase activity	GO:0017110	Molecular Function	66%
Blast2go	ATPase activity	GO:0016887	Molecular Function	66%

Source	InterPros	Term	Type	e value	Identity
Sma3	Nucleoside phosphatase GDA1/CD39	IPR000407	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: P80595

Fln msg: your sequence is shorter than subject: 82 - 454

Fln protein: TISYRDADKKYPNVTMNLPYVCMDLVYQYSLLVDGFGIKPQREVTFVDGLKYKDYQVDVSWAVGGAIDLLTLATKSMLVAY*

Protein Length: 83

Fln nts: ACGATAAGTTATAGAGATGCAGATAAAAAGTATCCGAATGTGACAATGAACCTCCCATATGTTTGCATGGACCTTGTGTATCAATACTCTTTATTAGTGGATGGTTTTGGTATCAAGCCTCAGAGAGAAGTAACATTTGTAGATGGGTTAAAATACAAGGATTACCAGGTTGATGTTTCGTGGGCTGTTGGTGGTGCTATTGATCTTCTTACCTTAGCTACTAAAAGTATGTTGGTAGCCTACTAA___ATATGCTATCTTGCTAGCAACATTTTA

Fln Alignment:

Contig2551___NLPYVCMDLVYQYSLLVDGFGIKPQREVTFVDGLKYKDYQVDVSWAVGGAIDLLTLATKSMLVA
P80595_________________NIPYLCMDLIYEYTLLVDGFGLNPHKEITVIHDVQYKNYLVGAAWPLGCAIDLVSSTTNKIRVA

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
97	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain