SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene1434

Length: 506 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene1434 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene3187	4/4

Source	Descriptions	Term	Type	Identity
AutoFact	Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI	-	-	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	72%
Blast2go	histone-lysine n-methyltransferase	-	-	63%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	0.0	63%

Source	KEGGs	Term	Identity
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	63%
Blast2go	Tetracycline biosynthesis	00253	63%
Blast2go	Histidine metabolism	00340	63%
Blast2go	Tyrosine metabolism	00350	63%
Blast2go	Phenylalanine metabolism	00360	63%
Blast2go	Tryptophan metabolism	00380	63%
Blast2go	Benzoxazinoid biosynthesis	00402	63%
Blast2go	Selenocompound metabolism	00450	63%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	63%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	63%
Blast2go	Methane metabolism	00680	63%
Blast2go	Porphyrin and chlorophyll metabolism	00860	63%
Blast2go	Carotenoid biosynthesis	00906	63%
Blast2go	Phenylpropanoid biosynthesis	00940	63%
Blast2go	Flavonoid biosynthesis	00941	63%
Blast2go	Anthocyanin biosynthesis	00942	63%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	63%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	63%
Blast2go	Insect hormone biosynthesis	00981	63%
Blast2go	Biosynthesis of type II polyketide products	01057	63%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	63%
Blast2go	Metabolic pathways	01100	63%
Blast2go	Biosynthesis of secondary metabolites	01110	63%

Source	GOs	Term	Type	Identity
Blast2go	primary metabolic process	GO:0044238	Biological Process	63%
Blast2go	cellular macromolecule metabolic process	GO:0044260	Biological Process	63%
Blast2go	methylation	GO:0032259	Biological Process	63%
Blast2go	binding	GO:0005488	Molecular Function	63%
Blast2go	methyltransferase activity	GO:0008168	Molecular Function	63%
Blast2go	nucleus	GO:0005634	Cellular Component	63%

Source	InterPros	Term	Type	Identity
Sma3	PWWP	IPR000313	-	-
Sma3	SET domain	IPR001214	-	-
Sma3	Zinc finger, PHD-type	IPR001965	-	-
Sma3	Protein kinase C-like, phorbol ester/diacylglycerol binding	IPR002219	-	-
Sma3	GYF	IPR003169	-	-
Sma3	Post-SET domain	IPR003616	-	-
Sma3	Histone-lysine N-methyltransferase	IPR015722	-	-
Sma3	AT hook, DNA-binding motif	IPR017956	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain