SustainPineDB

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Assembly info
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Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene1398

Length: 398 nt

UniGene Fasta

>biog3_v1.0_unigene1398
AATGTGGACCTTTTGCGTTTCGAAACATGGCGGGCTTGATAATTTTACTGCTTTCCTTGGTCAGGCTCACAAAGAATATGGCTCTGTAGTGAGGGTATGGCTTGGTCCTACTCAGCTTCTTGTATCTGTTAACAACCCGGAGCTAATACAGCAGATATTAGTGCAAGCAGAGGATCGATTGCCGCTTACTGGAAAGGCTTTTCAGCTTGCATTTGGGAAAAGCAGTCTATTTGTCTCATCCTTTCAACAGGTACAGAAGAGGCGGATTTCTCTAGAACGACAATTAAATGGGAAATTGCTGGAAAGAGTGCATTCAATCTCTCTGAAGGTTGTAGACCGTATTGAGCAATGGGCAGATGTAGGTCCTTCAGGTTTGGAACTTGATTGTAAATCAGAAC

Ace file of the UniGene biog3_v1.0_unigene1398

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2415	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[Q] COG2124 Cytochrome P450	-	-	1.0e-15	25%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	57%
Blast2go	cytochrome p450	-	-	0.0	54%

Source	GOs	Term	Type	e value	Identity
Blast2go	metal ion binding	GO:0046872	Molecular Function	0.0	54%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	0.0	54%

Source	InterPros	Term	Type	Identity
Sma3	Reverse transcriptase	IPR000477	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3		IPR015706	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6HVA0

Fln msg: Distance to subject end: 369 aas, your sequence is shorter than subject: 132 - 571

Fln protein: MWTFCVSKHGGLDNFTAFLGQAHKEYGSVVRVWLGPTQLLVSVNNPELIQQILVQAEDRLPLTGKAFQLAFGKSSLFVSSFQQVQKRRISLERQLNGKLLERVHSISLKVVDRIEQWADVGPSGLELDCKSE

Protein Length: 133

Fln nts: AATGTGGACCTTTTGCGTTTCGAAACATGGCGGGCTTGATAATTTTACTGCTTTCCTTGGTCAGGCTCACAAAGAATATGGCTCTGTAGTGAGGGTATGGCTTGGTCCTACTCAGCTTCTTGTATCTGTTAACAACCCGGAGCTAATACAGCAGATATTAGTGCAAGCAGAGGATCGATTGCCGCTTACTGGAAAGGCTTTTCAGCTTGCATTTGGGAAAAGCAGTCTATTTGTCTCATCCTTTCAACAGGTACAGAAGAGGCGGATTTCTCTAGAACGACAATTAAATGGGAAATTGCTGGAAAGAGTGCATTCAATCTCTCTGAAGGTTGTAGACCGTATTGAGCAATGGGCAGATGTAGGTCCTTCAGGTTTGGAACTTGATTGTAAATCAGAAC

Fln Alignment:

Contig1398___NFTAFLGQAHKEYGSVVRVWLGPTQLLVSVNNPELIQQILVQAEDRLPLTGKAFQLAFGKXXXXXXXXXXXXKRRISLERQLNGKLLERVHSISLKVVDRIEQWADVGPSGLELDCK
F6HVA0_________________NLTGLLSESHNKYGSVVKLWLGPTQLLVSIKDPVLIKEMLLKAEDKLPLTGRAFQLAFGPSSLFSSSFDKVQKRRELLAAELNGYLLQRANVISTKVVDHVMEKLHAIMGKGTLDCK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain