SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco3 v1.0

UniGene Name: biog3_v1.0_unigene616

Length: 583 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog3_v1.0_unigene616 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6593	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj\|BAB09724.1\| importin beta [Arabidopsis thaliana] gb\|AED96362.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	-	-	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	75%
Blast2go	protein	-	-	87%

Source	GOs	Term	Type	Identity
Blast2go	intracellular protein transport	GO:0006886	Biological Process	87%
Blast2go	binding	GO:0005488	Molecular Function	87%
Blast2go	protein transporter activity	GO:0008565	Molecular Function	87%

Source	InterPros	Term	Type	Identity
Sma3	HEAT	IPR000357	-	-
Sma3	Importin-beta, N-terminal	IPR001494	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	Peptidase S1/S6, chymotrypsin/Hap, active site	IPR018114	-	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
171	33	66			0.997452
175		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain