Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Ribonuclease III domain

Term: IPR000999  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1058 SustainPine v1.1 1317
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SN41_RICCO 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.88803e-37
Complete
sp_v1.1_unigene5476 SustainPine v1.1 218
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HYI3_POPTR 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 3.99796e-31
Internal
sp_v1.1_unigene5596 SustainPine v1.1 633
AutoFact: DCL901; dicer-like protein; K11592 endoribonuclease Dicer [EC:3.1.26.-] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
C-terminus
sp_v1.1_unigene5629 SustainPine v1.1 1172
AutoFact: CAF protein n=1 Tax=Arabidopsis thaliana RepID=Q56Y50_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
Complete
sp_v1.1_unigene14340 SustainPine v1.1 2496
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 0.0
Putative Complete
sp_v1.1_unigene17095 SustainPine v1.1 1807
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nfd2 (nuclear fusion defective 2) rna binding ribonuclease iii 0.0
Complete
sp_v1.1_unigene18011 SustainPine v1.1 720
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SIL6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
Internal
sp_v1.1_unigene24106 SustainPine v1.1 2297
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4J0_RICCO 0.0
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene29187 SustainPine v1.1 1026
AutoFact: Endoribonuclease Dicer homolog 1 n=2 Tax=Oryza sativa RepID=DCL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
Putative Complete
sp_v1.1_unigene44051 SustainPine v1.1 526
AutoFact: Unassigned protein
Blast2go: 60s ribosomal protein l3 0.0
Coding
sp_v1.1_unigene44895 SustainPine v1.1 423
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9SC13_RICCO 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shoot organization1 5.04375e-29
Internal
sp_v1.1_unigene57437 SustainPine v1.1 424
AutoFact: Ribonuclease III, putative (EC:3.1.26.3); K11592 endoribonuclease Dicer [EC:3.1.26.-] 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 1.51511e-33
Internal
sp_v1.1_unigene71441 SustainPine v1.1 418
AutoFact: RNA binding protein, putative; K11145 ribonuclease III family protein 8.0e-21
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: protein 2.4581e-23
Putative N-terminus
sp_v1.1_unigene76369 SustainPine v1.1 432
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: similarity to ribonuclease iii 2.7483e-27
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain