Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: cellular transcription, DNA-dependent

Term: GO:0006350  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene5320 SustainPine v1.1 748
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L102_MALDO 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 1.29895e-18
Putative Complete
sp_v1.1_unigene6392 SustainPine v1.1 1104
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 0.0
Putative N-terminus
sp_v1.1_unigene10042 SustainPine v1.1 1114
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Complete
sp_v1.1_unigene10715 SustainPine v1.1 941
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7UBN7_VITVI 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase alpha subunit 9.07081e-32
C-terminus
sp_v1.1_unigene10939 SustainPine v1.1 1347
AutoFact: YbaK/prolyl-tRNA synthetase family protein 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prolyl-trna synthetase family protein 0.0
C-terminus
sp_v1.1_unigene11240 SustainPine v1.1 429
AutoFact: YbaK/prolyl-tRNA synthetase family protein 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prolyl-trna synthetase 2.53712e-33
N-terminus
sp_v1.1_unigene11551 SustainPine v1.1 1378
AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
N-terminus
sp_v1.1_unigene11758 SustainPine v1.1 2616
AutoFact: Auxin-responsive protein IAA7 n=1 Tax=Picea abies RepID=B2KZF8_PICAB 0.0
FL-Next: tr=Auxin-responsive protein IAA7; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome-associated protein 1 0.0
Complete
sp_v1.1_unigene12141 SustainPine v1.1 506
AutoFact: XPA-binding protein, putative; K12867 pre-mRNA-splicing factor SYF1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: adapter protein ath-55 0.0
Internal
sp_v1.1_unigene12238 SustainPine v1.1 242
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 4.0e-28
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv 7.12484e-28
Internal
sp_v1.1_unigene12987 SustainPine v1.1 870
AutoFact: UvrD/REP helicase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B0L3_HERA2 4.0e-26
FL-Next: tr=ATP-dependent DNA helicase; Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga). 0.0
Blast2go: atp-dependent dna helicase 6.54581e-26
N-terminus
sp_v1.1_unigene13405 SustainPine v1.1 926
AutoFact: ERF transcription factor n=1 Tax=Solanum tuberosum RepID=A4ZX83_SOLTU 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 3.2357e-34
Putative C-terminus
sp_v1.1_unigene13814 SustainPine v1.1 444
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8T979_SELML 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.77124e-42
C-terminus
sp_v1.1_unigene14541 SustainPine v1.1 840
AutoFact: DNA-directed RNA polymerase III subunit F, putative; K03025 DNA-directed RNA polymerase III subunit C34 [EC:2.7.7.6] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene15249 SustainPine v1.1 1196
AutoFact: NRPB5; NRPB5; DNA binding / DNA-directed RNA polymerase; K03013 DNA-directed RNA polymerase II subunit E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15690 SustainPine v1.1 636
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 1.44756e-24
Complete
sp_v1.1_unigene16413 SustainPine v1.1 799
AutoFact: DNA-directed RNA polymerase II, putative; K03013 DNA-directed RNA polymerase II subunit E 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii and iii kda subunit 8.33197e-30
Putative Complete
sp_v1.1_unigene16628 SustainPine v1.1 3024
AutoFact: Poly(A) polymerase beta, putative n=1 Tax=Ricinus communis RepID=B9RS15_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: npap (nuclear poly polymerase) nucleotidyltransferase protein binding 0.0
Complete
sp_v1.1_unigene16740 SustainPine v1.1 457
AutoFact: Unassigned protein 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 7.88203e-19
Putative C-terminus
sp_v1.1_unigene16945 SustainPine v1.1 982
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain