Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA-binding pseudobarrel domain

Term: IPR015300  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2435 SustainPine v1.1 2225
AutoFact: ARF2; ARF2 (AUXIN RESPONSE FACTOR 2); protein binding / transcription factor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arf1-binding protein 0.0
N-terminus
sp_v1.1_unigene3195 SustainPine v1.1 996
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9S0L2_RICCO 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 0.0
Internal
sp_v1.1_unigene4669 SustainPine v1.1 1031
AutoFact: DNA binding / transcription factor 6.0e-09
FL-Next: sp=B3 domain-containing protein At3g06220; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v1.1_unigene6392 SustainPine v1.1 1104
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 0.0
Putative N-terminus
sp_v1.1_unigene6569 SustainPine v1.1 1311
AutoFact: ARF2; ARF2 (AUXIN RESPONSE FACTOR 2); protein binding / transcription factor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arf1-binding protein 0.0
Internal
sp_v1.1_unigene8524 SustainPine v1.1 941
AutoFact: DNA binding protein, putative 0.0
FL-Next: sp=B3 domain-containing protein Os05g0481400; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 0.0
N-terminus
sp_v1.1_unigene9324 SustainPine v1.1 1517
AutoFact: Auxin response factor, putative 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: arf4 protein 0.0
N-terminus
sp_v1.1_unigene17395 SustainPine v1.1 1575
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 0.0
Putative N-terminus
sp_v1.1_unigene18497 SustainPine v1.1 961
AutoFact: B3 domain-containing protein Os11g0197600 n=3 Tax=Oryza sativa RepID=Y1176_ORYSJ 5.0e-24
FL-Next: sp=B3 domain-containing protein Os11g0197600; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 7.18541e-24
C-terminus
sp_v1.1_unigene25875 SustainPine v1.1 1888
AutoFact: RAV2; RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE); DNA binding / transcription factor/ transcription repressor; K09287 RAV-like factor 0.0
FL-Next: tr=APETALA2-like protein 2; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: ap2 domain-containing transcription factor 0.0
Complete
sp_v1.1_unigene27794 SustainPine v1.1 3650
AutoFact: ARF-L2 protein (Fragment) n=1 Tax=Ginkgo biloba RepID=D4HTT9_GINBI 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 2 0.0
Complete
sp_v1.1_unigene28195 SustainPine v1.1 385
AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 6.0e-34
FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: abscisic acid-insensitive protein 3 3.01327e-34
Internal
sp_v1.1_unigene28507 SustainPine v1.1 803
AutoFact: B3 domain-containing transcription factor FUS3 n=2 Tax=Arabidopsis RepID=FUS3_ARATH 1.0e-35
FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
Blast2go: fusca 3 1.75849e-35
C-terminus
sp_v1.1_unigene30119 SustainPine v1.1 975
AutoFact: Auxin response factor, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 6 8 0.0
Internal
sp_v1.1_unigene31604 SustainPine v1.1 666
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9S0L2_RICCO 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 0.0
N-terminus
sp_v1.1_unigene32119 SustainPine v1.1 753
AutoFact: FUSCA3 n=1 Tax=Hordeum vulgare subsp. vulgare RepID=B1V8R3_HORVD 3.0e-29
FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
Blast2go: abscisic acid-insensitive protein 3 1.40418e-29
Internal
sp_v1.1_unigene34388 SustainPine v1.1 495
AutoFact: B3 DNA binding domain, putative [Oryza sativa Japonica Group] 8.0e-15
FL-Next: sp=B3 domain-containing protein Os11g0197600; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 1.14631e-17
Putative C-terminus
sp_v1.1_unigene34682 SustainPine v1.1 280
AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 6.0e-32
FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: abscisic acid-insensitive protein 3 1.04387e-31
Internal
sp_v1.1_unigene36073 SustainPine v1.1 620
AutoFact: B3 domain containing protein 6.0e-05
Coding
sp_v1.1_unigene39383 SustainPine v1.1 332
AutoFact: transcription factor, putative 6.0e-35
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 2.46928e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain