Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene16442 SustainPine v1.1 2185
• AutoFact: Ethylene response factor 1 n=1 Tax=Cucumis sativus RepID=Q5S004_CUCSA 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive element binding factor-like protein 5.46522e-14
Complete
sp_v1.1_unigene16533 SustainPine v1.1 1300
• AutoFact: Phytochrome-associated serine/threonine protein phosphatase 1 n=18 Tax=Embryophyta RepID=FYPP1_ARATH 0.0
• FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene16583 SustainPine v1.1 819
• AutoFact: acetylornithine transaminase (EC:2.6.1.11); K00818 acetylornithine aminotransferase [EC:2.6.1.11] 0.0
• FL-Next: tr=Ornithine aminotransferase; Pinus sylvestris (Scots pine). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene16585 SustainPine v1.1 1065
• AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9S139_RICCO 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hmg protein 2.01937e-25
C-terminus
sp_v1.1_unigene16591 SustainPine v1.1 1815
• AutoFact: Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribulose bisphosphate carboxylase oxygenase activase chloroplast 0.0
Complete
sp_v1.1_unigene16617 SustainPine v1.1 1194
• AutoFact: MADS-box family transcription factor n=2 Tax=Pinus RepID=P93468_PINRE 0.0
• FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: mads-box protein 0.0
Complete
sp_v1.1_unigene16666 SustainPine v1.1 1667
• AutoFact: Ocs element-binding factor, putative n=1 Tax=Ricinus communis RepID=B9R7Z2_RICCO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ocs element-binding 0.0
Complete
sp_v1.1_unigene16714 SustainPine v1.1 1605
• AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
• FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
• Blast2go: homeodomain transcription factor 0.0
C-terminus
sp_v1.1_unigene16732 SustainPine v1.1 468
• AutoFact: transcription factor, putative 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene16940 SustainPine v1.1 888
• AutoFact: CDF1; CDF1 (CELL GROWTH DEFECT FACTOR 1) 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene16990 SustainPine v1.1 1469
• AutoFact: NF-YB3; NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccaat-box binding factor hap3 0.0
Complete
sp_v1.1_unigene17131 SustainPine v1.1 737
• AutoFact: Barley B recombinant n=1 Tax=Hordeum vulgare RepID=Q8GUC3_HORVU 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gaga binding family expressed 0.0
C-terminus
sp_v1.1_unigene17171 SustainPine v1.1 2023
• AutoFact: Homeobox domain containing protein 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene17215 SustainPine v1.1 390
• AutoFact: Transcription repressor MYB4 n=4 Tax=Brassicaceae RepID=MYB4_ARATH 3.00018e-42
• FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: transcription factor myb4 3.87179e-42
N-terminus
sp_v1.1_unigene17395 SustainPine v1.1 1575
• AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Blast2go: auxin response 0.0
Putative N-terminus
sp_v1.1_unigene17442 SustainPine v1.1 1114
• AutoFact: basic helix-loop-helix (bHLH) family protein 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.01018e-14
Putative Complete
sp_v1.1_unigene17545 SustainPine v1.1 568
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor jumonji domain-containing protein 0.0
N-terminus
sp_v1.1_unigene17743 SustainPine v1.1 631
• AutoFact: SCRM2 (SCREAM 2); DNA binding / transcription factor n=1 Tax=Arabidopsis thaliana RepID=UPI0000162D53 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: scrm2 (scream 2) dna binding transcription factor 3.64313e-23
C-terminus
sp_v1.1_unigene17827 SustainPine v1.1 679
• AutoFact: Short-root n=1 Tax=Pinus radiata RepID=B4XI11_PINRA 0.0
• FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: gras family transcription factor 0.0
Internal
sp_v1.1_unigene17910 SustainPine v1.1 529
• AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB5_MALDO 0.0
• FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: gras family transcription factor 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain