Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Histone deacetylase domain

Term: IPR023801  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene71 SustainPine v1.1 1464
AutoFact: similar to HDA14 (histone deacetylase 14); histone deacetylase 0.0
FL-Next: sp=Histone deacetylase 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v1.1_unigene396 SustainPine v1.1 2540
AutoFact: HDA902; histone deacetylase; K06067 histone deacetylase 1/2 [EC:3.5.1.98] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v1.1_unigene1029 SustainPine v1.1 1570
AutoFact: Histone deacetylase complex, catalytic component HDA1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SZN1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase catalytic component hda1 0.0
Complete
sp_v1.1_unigene3959 SustainPine v1.1 653
AutoFact: PREDICTED: similar to HDA6 (HISTONE DEACETYLASE 6); histone deacetylase n=1 Tax=Vitis vinifera RepID=UPI0001985221 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Internal
sp_v1.1_unigene9200 SustainPine v1.1 2104
AutoFact: Class I RPD3 type histone deacetylase protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v1.1_unigene19982 SustainPine v1.1 1784
AutoFact: HDA2; HDA2; histone deacetylase; K11418 histone deacetylase 11 [EC:3.5.1.98] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: class iii rpd3 type histone deacetylase protein 0.0
Complete
sp_v1.1_unigene20020 SustainPine v1.1 1300
AutoFact: HDA904; histone deacetylase; K06067 histone deacetylase 1/2 [EC:3.5.1.98] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
C-terminus
sp_v1.1_unigene27989 SustainPine v1.1 1049
AutoFact: PREDICTED: similar to HDA6 (HISTONE DEACETYLASE 6); histone deacetylase n=1 Tax=Vitis vinifera RepID=UPI0001985221 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 5.7472e-34
Complete
sp_v1.1_unigene30924 SustainPine v1.1 280
AutoFact: HDA904; histone deacetylase; K06067 histone deacetylase 1/2 [EC:3.5.1.98] 2.0e-22
FL-Next: sp=Histone deacetylase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 4.46523e-22
N-terminus
sp_v1.1_unigene37901 SustainPine v1.1 681
AutoFact: Histone deacetylase HDAC4 n=1 Tax=Triticum aestivum RepID=Q0Z9W1_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
C-terminus
sp_v1.1_unigene41774 SustainPine v1.1 323
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RE34_RICCO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 3.99144e-34
Internal
sp_v1.1_unigene61533 SustainPine v1.1 345
AutoFact: histone deacetylase hda1, putative 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 1.25556e-36
Internal
sp_v1.1_unigene61879 SustainPine v1.1 288
AutoFact: Class I RPD3 type histone deacetylase protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 9.0e-33
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 1.69409e-32
Putative N-terminus
sp_v1.1_unigene64681 SustainPine v1.1 465
AutoFact: Histone deacetylase complex, catalytic component HDA1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SZN1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain