Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene150 SustainPine v1.1 1648
• AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone acetyltransferase 0.0
C-terminus
sp_v1.1_unigene274 SustainPine v1.1 1148
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: spl1-related2 protein 0.0
Internal
sp_v1.1_unigene492 SustainPine v1.1 1331
• AutoFact: 50S ribosomal protein L21 n=4 Tax=Andropogoneae RepID=B6TJJ8_MAIZE 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein l21 0.0
Complete
sp_v1.1_unigene1410 SustainPine v1.1 1740
• AutoFact: AREB3; AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3); DNA binding / transcription activator/ transcription factor 5.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene1668 SustainPine v1.1 3153
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at2g46020-like protein 0.0
C-terminus
sp_v1.1_unigene1722 SustainPine v1.1 922
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor 6.73833e-16
Internal
sp_v1.1_unigene1952 SustainPine v1.1 1069
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: swi snf class chromatin remodeling complex protein 0.0
N-terminus
sp_v1.1_unigene2480 SustainPine v1.1 2844
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v1.1_unigene2995 SustainPine v1.1 777
• AutoFact: zinc finger (CCCH-type) family protein 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccch-type zinc finger protein 4.60281e-38
Internal
sp_v1.1_unigene3055 SustainPine v1.1 757
• AutoFact: ccaat-binding transcription factor subunit A, putative 1.4013e-45
• FL-Next: sp=Nuclear transcription factor Y subunit B-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ccaat-box binding factor hap3 0.0
Complete
sp_v1.1_unigene4980 SustainPine v1.1 779
• AutoFact: CDF1; CDF1 (CELL GROWTH DEFECT FACTOR 1) 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at5g23040 myj24_3 0.0
N-terminus
sp_v1.1_unigene5440 SustainPine v1.1 1443
• AutoFact: R2R3-MYB transcription factor MYB22 (Fragment) n=1 Tax=Pinus taeda RepID=C0JTE2_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor myb4 0.0
Putative Complete
sp_v1.1_unigene5636 SustainPine v1.1 1711
• AutoFact: Cleavage and polyadenylation specificity factor, putative n=1 Tax=Ricinus communis RepID=B9RVY3_RICCO 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: cleavage and polyadenylation specificity factor 0.0
C-terminus
sp_v1.1_unigene5741 SustainPine v1.1 973
• AutoFact: ATP binding protein, putative (EC:1.3.1.74) 3.0e-29
• FL-Next: sp=MAR-binding filament-like protein 1-1; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: atp binding 1.48208e-32
Internal
sp_v1.1_unigene5872 SustainPine v1.1 270
• AutoFact: cleavage and polyadenylation specificity factor, putative 5.0e-23
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: cleavage and polyadenylation specificity factor 6.26966e-24
Internal
sp_v1.1_unigene6347 SustainPine v1.1 1731
• AutoFact: negative cofactor 2 transcriptional co-repressor, putative 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: negative cofactor 2 transcriptional co- 1.68156e-44
Putative Complete
sp_v1.1_unigene7313 SustainPine v1.1 924
• AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 4.0e-20
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: sex determining protein 2.04195e-20
Putative C-terminus
sp_v1.1_unigene7479 SustainPine v1.1 825
• AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock transcription factor 1 0.0
Putative N-terminus
sp_v1.1_unigene7487 SustainPine v1.1 458
• AutoFact: DNA repair protein recA homolog 1, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=RECAC_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna repair protein 0.0
Internal
sp_v1.1_unigene7638 SustainPine v1.1 460
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
• FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
• Blast2go: at2g46020-like protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain