Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene7728 SustainPine v1.1 739
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 0.0
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
sp_v1.1_unigene8131 SustainPine v1.1 957
AutoFact: polypyrimidine tract binding protein, putative (EC:1.3.1.74) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polypyrimidine tract binding 0.0
N-terminus
sp_v1.1_unigene8210 SustainPine v1.1 1229
AutoFact: MAPKKK15; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene8212 SustainPine v1.1 949
AutoFact: Calmodulin n=3 Tax=Zea mays RepID=B6SMJ0_MAIZE 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium binding protein 0.0
Complete
sp_v1.1_unigene8221 SustainPine v1.1 1062
AutoFact: GTP-binding protein lepA, putative 0.0
FL-Next: sp=Translation factor GUF1 homolog, mitochondrial; Ricinus communis (Castor bean). 0.0
Blast2go: guf1 gtpase homolog ( cerevisiae) 0.0
Internal
sp_v1.1_unigene8340 SustainPine v1.1 2206
AutoFact: myosin XI, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene8416 SustainPine v1.1 748
AutoFact: Condensin complex component SMC3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U123_PHYPA 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromosome associated protein 0.0
N-terminus
sp_v1.1_unigene8430 SustainPine v1.1 1518
AutoFact: calcium-dependent protein kinase, putative (EC:2.7.11.17) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-dependent protein kinase 0.0
Putative N-terminus
sp_v1.1_unigene8826 SustainPine v1.1 1160
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative C-terminus
sp_v1.1_unigene8847 SustainPine v1.1 835
AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac090485_10 retroelement 0.0
Complete
sp_v1.1_unigene8911 SustainPine v1.1 1977
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 domain-containing protein helicase domain-containing protein ring finger domain-containing protein 0.0
Putative Complete
sp_v1.1_unigene8926 SustainPine v1.1 2153
AutoFact: Putative RNA-binding protein n=1 Tax=Solanum lycopersicum RepID=B1N661_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rrm-containing rna-binding 0.0
Putative Complete
sp_v1.1_unigene8945 SustainPine v1.1 904
AutoFact: mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative (EC:1.3.1.74) 7.0e-19
FL-Next: sp=Mitogen-activated protein kinase kinase kinase ANP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mitogen activated protein kinase kinase kinase 8.22578e-19
C-terminus
sp_v1.1_unigene9024 SustainPine v1.1 508
AutoFact: myosin XI, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: unconventional myosin 0.0
Internal
sp_v1.1_unigene9035 SustainPine v1.1 666
AutoFact: Serine/threonine-protein kinase PBS1, putative (EC:2.7.11.16) 8.0e-12
FL-Next: sp=Protein STRUBBELIG-RECEPTOR FAMILY 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 7.0013e-12
C-terminus
sp_v1.1_unigene9199 SustainPine v1.1 924
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase-like transcription factor 0.0
Putative N-terminus
sp_v1.1_unigene9267 SustainPine v1.1 2346
AutoFact: Os05g0333500 protein n=3 Tax=Oryza sativa RepID=Q5W730_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene9338 SustainPine v1.1 602
AutoFact: Unassigned protein
FL-Next: sp=E3 ubiquitin-protein ligase XB3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ring zinc finger ankyrin protein 2.69816e-27
C-terminus
sp_v1.1_unigene9449 SustainPine v1.1 763
AutoFact: Lysyl-tRNA synthetase n=1 Tax=Oryza sativa Japonica Group RepID=Q6K1T2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysyl-trna synthetase 0.0
Internal
sp_v1.1_unigene9651 SustainPine v1.1 1363
AutoFact: si606059b05; LOC100284891; K12849 pre-mRNA-splicing factor 38A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna processing factor 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain