Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene5140 SustainPine v1.1 984
• AutoFact: DNA binding protein, putative 2.0e-23
• FL-Next: Isoform 2 of TSL-kinase interacting protein 1 OS=Arabidopsis thaliana GN=TKI1 0.0
• Blast2go: tsl-kinase interacting protein 1 2.57142e-24
C-terminus
sp_v1.1_unigene5153 SustainPine v1.1 1518
• AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9RFU0_RICCO 0.0
• FL-Next: sp=Cytochrome P450 704C1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: at1g31800 68069_m00159 0.0
Putative C-terminus
sp_v1.1_unigene5204 SustainPine v1.1 402
• AutoFact: Zinc finger CCCH domain-containing protein 56 n=3 Tax=Oryza sativa RepID=C3H56_ORYSJ 7.0e-22
• FL-Next: sp=Zinc finger CCCH domain-containing protein 56; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein 4.08086e-23
Internal
sp_v1.1_unigene5308 SustainPine v1.1 639
• AutoFact: serine/arginine rich splicing factor, putative; K12891 splicing factor, arginine/serine-rich 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine arginine rich splicing 0.0
N-terminus
sp_v1.1_unigene5408 SustainPine v1.1 1740
• AutoFact: Zinc finger CCCH domain-containing protein 18 n=3 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger (ccch-type) 0.0
Complete
sp_v1.1_unigene5450 SustainPine v1.1 2667
• AutoFact: DNA-directed RNA polymerase n=3 Tax=core eudicotyledons RepID=A5C1N0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase ii second largest subunit 0.0
Complete
sp_v1.1_unigene5939 SustainPine v1.1 1372
• AutoFact: zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] sp|Q9SJ41.1|C3H18_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 18; Short=AtC3H18 gb|AAD29054.1| hypothetical protein [Arabidop 0.0
• FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene6091 SustainPine v1.1 322
• AutoFact: Chaperonin Cpn60/TCP-1; Phosphatidylinositol-4-phosphate 5-kinase; Zinc finger, FYVE/PHD-type n=1 Tax=Medicago truncatula RepID=A4Q7Q7_MEDTR 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fyve finger-containing phosphoinositide 1.83421e-39
Internal
sp_v1.1_unigene6262 SustainPine v1.1 581
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v1.1_unigene6392 SustainPine v1.1 1104
• AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Blast2go: auxin response 0.0
Putative N-terminus
sp_v1.1_unigene6450 SustainPine v1.1 1227
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4Z1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene6657 SustainPine v1.1 1326
• AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFD0_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
sp_v1.1_unigene6758 SustainPine v1.1 1084
• AutoFact: Pre-mRNA branch site protein p14, putative; K12833 pre-mRNA branch site protein p14 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna branch site p14-like protein 0.0
Complete
sp_v1.1_unigene6765 SustainPine v1.1 1227
• AutoFact: ring finger protein, putative 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring zinc finger 0.0
Complete
sp_v1.1_unigene6777 SustainPine v1.1 1220
• AutoFact: MYST-type acetyltransferase (Fragment) n=1 Tax=Solanum chacoense RepID=Q6V9I3_SOLCH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone acetyltransferase 0.0
C-terminus
sp_v1.1_unigene6915 SustainPine v1.1 1745
• AutoFact: HNRNPR, HNRPR; heterogeneous nuclear ribonucleoprotein R; K13161 heterogeneous nuclear ribonucleoprotein R 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heterogeneous nuclear ribonucleoprotein r 0.0
Complete
sp_v1.1_unigene7052 SustainPine v1.1 617
• AutoFact: Cytochrome P450 n=1 Tax=Pyrus communis RepID=Q8W228_PYRCO 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome p450 monooxygenase cyp736b 1.87749e-26
Putative N-terminus
sp_v1.1_unigene7260 SustainPine v1.1 1716
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u2 snrnp auxiliary small 0.0
Complete
sp_v1.1_unigene7283 SustainPine v1.1 409
• AutoFact: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related 3.0e-25
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 1.14004e-25
Internal
sp_v1.1_unigene7664 SustainPine v1.1 2421
• AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fyve finger-containing phosphoinositide 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain