Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene82586 SustainPine v1.1 339
AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 2.0e-29
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: retrotransposon identical 1.70993e-29
Putative N-terminus
sp_v1.1_unigene82845 SustainPine v1.1 611
AutoFact: Polyprotein n=1 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.99965e-42
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold 8.28167e-43
Putative C-terminus
sp_v1.1_unigene83372 SustainPine v1.1 465
AutoFact: Histone acetyltransferase n=4 Tax=rosids RepID=B9H794_POPTR 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
N-terminus
sp_v1.1_unigene83693 SustainPine v1.1 819
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 8.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor u2af 38 kda subunit 4.94641e-30
Putative C-terminus
sp_v1.1_unigene83896 SustainPine v1.1 437
AutoFact: DNA repair helicase rad5,16, putative (EC:2.7.11.1) 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 0.0
Internal
sp_v1.1_unigene84023 SustainPine v1.1 675
AutoFact: Pre-mRNA branch site protein p14, putative; K12833 pre-mRNA branch site protein p14 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna branch site p14-like protein 0.0
Complete
sp_v1.1_unigene84109 SustainPine v1.1 563
AutoFact: AtRab18 n=2 Tax=Arabidopsis RepID=O23657_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
Putative C-terminus
sp_v1.1_unigene84357 SustainPine v1.1 475
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 4.0e-22
FL-Next: sp=Histone acetyltransferase HAC12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone acetyltransferase 7.42477e-22
C-terminus
sp_v1.1_unigene90724 SustainPine v1.1 392
AutoFact: Kinesin-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FW70_ORYSJ 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-related protein 1.86997e-20
C-terminus
sp_v1.1_unigene91080 SustainPine v1.1 761
AutoFact: Putative U2 snRNP auxiliary factor (Fragment) n=1 Tax=Chenopodium rubrum RepID=Q1H8Q9_CHERU 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 1.19998e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain