Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene3490 SustainPine v1.1 820
AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S1S1_RICCO 0.0
FL-Next: sp=AP-4 complex subunit epsilon; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-1 complex subunit gamma- 0.0
Putative N-terminus
sp_v1.1_unigene3728 SustainPine v1.1 3460
AutoFact: CLPC1; CLPC1; ATP binding / ATP-dependent peptidase/ ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent protease 0.0
Complete
sp_v1.1_unigene3755 SustainPine v1.1 1852
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair helicase 0.0
Putative Complete
sp_v1.1_unigene3845 SustainPine v1.1 572
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9SN70_RICCO 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 0.0
Internal
sp_v1.1_unigene4106 SustainPine v1.1 1774
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R9L5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Putative C-terminus
sp_v1.1_unigene4209 SustainPine v1.1 1734
AutoFact: DNA repair protein reca, putative (EC:3.6.3.8); K03553 recombination protein RecA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reca protein 0.0
C-terminus
sp_v1.1_unigene4212 SustainPine v1.1 1188
AutoFact: CHB905; chromatin remodeling complex subunit; K11649 SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C 2.0e-13
FL-Next: sp=SWI/SNF complex subunit SWI3B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit sw13 1.46971e-13
Putative C-terminus
sp_v1.1_unigene4393 SustainPine v1.1 959
AutoFact: Cytochrome P450 90A1 n=3 Tax=Arabidopsis RepID=C90A1_ARATH 0.0
FL-Next: tr=Cytochrome P450 90A20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 90a1 0.0
N-terminus
sp_v1.1_unigene4511 SustainPine v1.1 1708
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Putative C-terminus
sp_v1.1_unigene4544 SustainPine v1.1 2707
AutoFact: Cell division protein ftsH, putative (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: filamentation temperature-sensitive h 2b 0.0
Complete
sp_v1.1_unigene4553 SustainPine v1.1 1233
AutoFact: similar to TGA-type basic leucine zipper protein TGA2.1 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Blast2go: bzip transcription factor 0.0
C-terminus
sp_v1.1_unigene4679 SustainPine v1.1 959
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S7A6_RICCO 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 4.03442e-35
Putative C-terminus
sp_v1.1_unigene4832 SustainPine v1.1 3732
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene4896 SustainPine v1.1 1671
AutoFact: phd finger transcription factor, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ebs-bah-phd domain-containing protein 0.0
Complete
sp_v1.1_unigene4939 SustainPine v1.1 1251
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase domain-containing protein 0.0
Putative C-terminus
sp_v1.1_unigene4941 SustainPine v1.1 779
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger CCCH domain-containing protein 53; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 1.58932e-22
N-terminus
sp_v1.1_unigene4947 SustainPine v1.1 1249
AutoFact: EBP1502; BAH-PHD domain-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah-phd domain-containing protein 0.0
Complete
sp_v1.1_unigene4973 SustainPine v1.1 1491
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SMM3_RICCO 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine protein plant- 0.0
Complete
sp_v1.1_unigene5018 SustainPine v1.1 3445
AutoFact: RNA recognition motif (RRM)-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene5032 SustainPine v1.1 940
AutoFact: Casein kinase II, alpha chain, putative n=1 Tax=Ricinus communis RepID=B9SGY9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase ii alpha subunit 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain