Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2007 SustainPine v1.1 2388
AutoFact: Ribonucleoside-diphosphate reductase n=2 Tax=Magnoliophyta RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleotide reductase 0.0
C-terminus
sp_v1.1_unigene2010 SustainPine v1.1 3198
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene2034 SustainPine v1.1 2674
AutoFact: aspartate kinase, putative (EC:2.7.2.4 1.1.1.3); K12524 bifunctional aspartokinase/homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] 0.0
FL-Next: sp=Homoserine dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartate kinase-homoserine dehydrogenase 0.0
Complete
sp_v1.1_unigene2043 SustainPine v1.1 2540
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Putative Complete
sp_v1.1_unigene2133 SustainPine v1.1 1051
AutoFact: ATP-dependent RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene2231 SustainPine v1.1 771
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8B0_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 1.4013e-45
Internal
sp_v1.1_unigene2385 SustainPine v1.1 1485
AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-h2 finger protein 0.0
Complete
sp_v1.1_unigene2405 SustainPine v1.1 2983
AutoFact: Calcium/calmodulin-dependent protein kinase CaMK3 n=1 Tax=Nicotiana tabacum RepID=Q8W559_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cdpk-related protein kinase 0.0
Complete
sp_v1.1_unigene2424 SustainPine v1.1 1400
AutoFact: phenylalanine-tRNA ligase (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene2471 SustainPine v1.1 1904
AutoFact: elongation factor family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein 0.0
C-terminus
sp_v1.1_unigene2518 SustainPine v1.1 985
AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna gyrase b subunit 0.0
N-terminus
sp_v1.1_unigene2544 SustainPine v1.1 1865
AutoFact: replication factor C / DNA polymerase III gamma-tau subunit, putative (EC:2.7.7.7); K10756 replication factor C subunit 3/5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c 36kda subunit 0.0
Complete
sp_v1.1_unigene2827 SustainPine v1.1 3115
AutoFact: 116 kD U5 small nuclear ribonucleoprotein component, putative; K12852 116 kDa U5 small nuclear ribonucleoprotein component 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor tu gtp-binding domain protein 2 0.0
Putative Complete
sp_v1.1_unigene2942 SustainPine v1.1 520
AutoFact: phenylalanine-tRNA ligase (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding protein 0.0
Internal
sp_v1.1_unigene3091 SustainPine v1.1 789
AutoFact: [R] COG1100 GTPase SAR1 and related small G proteins 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Complete
sp_v1.1_unigene3104 SustainPine v1.1 1235
AutoFact: zinc finger protein, putative; K06874 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: zinc finger (zpr1-type) family protein 0.0
C-terminus
sp_v1.1_unigene3111 SustainPine v1.1 1672
AutoFact: JmjC domain containing protein 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
Putative Complete
sp_v1.1_unigene3273 SustainPine v1.1 1010
AutoFact: AtRab18 n=2 Tax=Arabidopsis RepID=O23657_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Complete
sp_v1.1_unigene3347 SustainPine v1.1 534
AutoFact: DNA binding / nucleic acid binding / zinc ion binding; K07466 replication factor A1 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: replication protein a 70kda 0.0
Internal
sp_v1.1_unigene3436 SustainPine v1.1 1200
AutoFact: DEAD-box protein abstrakt, putative; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain