Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: regulation of cellular transcription, DNA-dependent

Term: GO:0045449  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene17972 SustainPine v1.1 763
• AutoFact: Transcription regulation protein (Fragment) n=2 Tax=Pseudotsuga RepID=C6F6J4_PSEMZ 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription regulation protein 0.0
N-terminus
sp_v1.1_unigene17992 SustainPine v1.1 1130
• AutoFact: high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family protein 0.0
C-terminus
sp_v1.1_unigene18078 SustainPine v1.1 482
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBX9_RICCO 5.0e-39
• FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 8.92624e-39
Internal
sp_v1.1_unigene18115 SustainPine v1.1 580
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T755_RICCO 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: proton-dependent oligopeptide transport family protein 7.70152e-21
Putative N-terminus
sp_v1.1_unigene18197 SustainPine v1.1 410
• AutoFact: Putative basic helix-loop-helix protein BHLH21 n=1 Tax=Lotus japonicus RepID=C0JP28_LOTJA 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fe-deficiency induced transcription factor 1 2.72336e-19
Internal
sp_v1.1_unigene18221 SustainPine v1.1 967
• AutoFact: Auxin-responsive protein IAA13, putative 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin-responsive protein 6.81544e-14
C-terminus
sp_v1.1_unigene18372 SustainPine v1.1 308
• AutoFact: NAC domain protein, IPR003441 n=2 Tax=Populus trichocarpa RepID=B9GU14_POPTR 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nac domain ipr003441 4.61804e-19
Internal
sp_v1.1_unigene18422 SustainPine v1.1 1280
• AutoFact: R2r3-myb transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SHV5_RICCO 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB1; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: transcription factor 0.0
Putative Complete
sp_v1.1_unigene18430 SustainPine v1.1 910
• AutoFact: WRKY transcription factor 1 (Fragment) n=2 Tax=Pinaceae RepID=B2KZJ7_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky transcription 0.0
Putative C-terminus
sp_v1.1_unigene18538 SustainPine v1.1 841
• AutoFact: No apical meristem-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZFA1_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: no apical meristem-like protein 0.0
Putative N-terminus
sp_v1.1_unigene18671 SustainPine v1.1 922
• AutoFact: HLH domain containing protein 7.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Complete
sp_v1.1_unigene18848 SustainPine v1.1 743
• AutoFact: dof zinc finger protein 12 [Hordeum vulgare subsp. vulgare] 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 1.23457e-21
N-terminus
sp_v1.1_unigene18909 SustainPine v1.1 770
• AutoFact: KDR; KDR (KIDARI); transcription regulator 1.0e-23
• FL-Next: sp=Transcription factor bHLH135; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-binding protein 2.39904e-23
Complete
sp_v1.1_unigene18949 SustainPine v1.1 1516
• AutoFact: AMS; AMS (ABORTED MICROSPORES); DNA binding / transcription factor 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene18976 SustainPine v1.1 1291
• AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
• FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
• Blast2go: dna replication licensing factor 0.0
N-terminus
sp_v1.1_unigene18999 SustainPine v1.1 567
• AutoFact: Afc, putative n=1 Tax=Ricinus communis RepID=B9T436_RICCO 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.98417e-12
Internal
sp_v1.1_unigene19070 SustainPine v1.1 431
• AutoFact: MYB domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ53_MALDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: r2r3-myb transcription 0.0
N-terminus
sp_v1.1_unigene19273 SustainPine v1.1 2181
• AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fact complex subunit 0.0
N-terminus
sp_v1.1_unigene19277 SustainPine v1.1 665
• AutoFact: TCP-domain protein n=6 Tax=Andropogoneae RepID=B6SIN5_MAIZE 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tcp-domain protein 2.14173e-29
Putative N-terminus
sp_v1.1_unigene19386 SustainPine v1.1 336
• AutoFact: Ethylene-responsive element binding factor 4 n=1 Tax=Glycine max RepID=B3VHW0_SOYBN 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive transcription 8.43162e-13
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain