Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene47 SustainPine v1.1 2545
AutoFact: predicted protein; K10843 DNA excision repair protein ERCC-3 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and transcription factor xpb1 0.0
N-terminus
sp_v1.1_unigene79 SustainPine v1.1 2309
AutoFact: Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 n=1 Tax=Arabidopsis thaliana RepID=STOP1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c2-h2 zinc finger protein 0.0
Complete
sp_v1.1_unigene109 SustainPine v1.1 1044
AutoFact: BTB/POZ domain-containing protein KCTD9, putative n=1 Tax=Ricinus communis RepID=B9SI86_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene111 SustainPine v1.1 1168
AutoFact: PTP1; PTP1 (PROTEIN TYROSINE PHOSPHATASE 1); protein tyrosine phosphatase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein tyrosine phosphatase 0.0
C-terminus
sp_v1.1_unigene127 SustainPine v1.1 3408
AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9R871_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 5 -3 exoribonuclease 2 0.0
Complete
sp_v1.1_unigene147 SustainPine v1.1 2702
AutoFact: Argonaute family member n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6J3_PHYPA 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute family member 0.0
C-terminus
sp_v1.1_unigene153 SustainPine v1.1 1785
AutoFact: Riboflavin synthase, alpha subunit n=1 Tax=Roseiflexus sp. RS-1 RepID=A5URX5_ROSS1 0.0
FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Blast2go: riboflavin synthase subunit alpha 0.0
Complete
sp_v1.1_unigene178 SustainPine v1.1 2285
AutoFact: NEDD8-activating enzyme E1 regulatory subunit, putative; K04532 amyloid beta precursor protein binding protein 1 0.0
FL-Next: sp=NEDD8-activating enzyme E1 regulatory subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene230 SustainPine v1.1 1330
AutoFact: phosphatidylinositol-4-phosphate 5-kinase, putative (EC:2.7.1.68) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatidylinositol-4-phosphate 5-kinase 0.0
C-terminus
sp_v1.1_unigene274 SustainPine v1.1 1148
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: spl1-related2 protein 0.0
Internal
sp_v1.1_unigene275 SustainPine v1.1 979
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=B8LMJ3_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 e3 0.0
Complete
sp_v1.1_unigene289 SustainPine v1.1 1422
AutoFact: BTB and MATH domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SI73_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene346 SustainPine v1.1 2234
AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Blast2go: actin related protein 0.0
Complete
sp_v1.1_unigene396 SustainPine v1.1 2540
AutoFact: HDA902; histone deacetylase; K06067 histone deacetylase 1/2 [EC:3.5.1.98] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v1.1_unigene417 SustainPine v1.1 2634
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine n-methyltransferase family protein 0.0
Complete
sp_v1.1_unigene436 SustainPine v1.1 1583
AutoFact: fructose-bisphosphate aldolase 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: ketose-bisphosphate aldolase class-ii family protein 0.0
C-terminus
sp_v1.1_unigene473 SustainPine v1.1 761
AutoFact: BUD13 homolog [Gallus gallus] sp|Q5ZIJ0.1|BUD13_CHICK RecName: Full=BUD13 homolog emb|CAG32453.1| hypothetical protein [Gallus gallus] 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene490 SustainPine v1.1 1484
AutoFact: phosphoglycolate phosphatase (EC:3.1.3.18) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pglp1 (2-phosphoglycolate phosphatase 1) phosphoglycolate phosphatase 0.0
Complete
sp_v1.1_unigene504 SustainPine v1.1 1056
AutoFact: Polcalcin Jun o, putative n=1 Tax=Ricinus communis RepID=B9SJ25_RICCO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polcalcin 2.11875e-35
Complete
sp_v1.1_unigene508 SustainPine v1.1 1827
AutoFact: DNA-damage repair protein drt111, putative; K12840 splicing factor 45 0.0
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain