Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene4748 SustainPine v1.1 755
AutoFact: kinesin, putative; K10405 kinesin family member C1 0.0
FL-Next: sp=Kinesin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene4751 SustainPine v1.1 3000
AutoFact: armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=ARM REPEAT PROTEIN INTERACTING WITH ABF2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene4816 SustainPine v1.1 1562
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RLP1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
C-terminus
sp_v1.1_unigene4824 SustainPine v1.1 1623
AutoFact: LFR; LFR (LEAF AND FLOWER RELATED); binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene4832 SustainPine v1.1 3732
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene4923 SustainPine v1.1 1021
AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RDE1_RICCO 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.969e-42
Putative Complete
sp_v1.1_unigene4925 SustainPine v1.1 715
AutoFact: RNA-dependent RNA polymerase 6 n=5 Tax=Nicotiana RepID=A9CRC9_TOBAC 0.0
FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna-dependent rna polymerase 6 0.0
Internal
sp_v1.1_unigene4935 SustainPine v1.1 2487
AutoFact: DNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helix-loop-helix dna-binding 0.0
Complete
sp_v1.1_unigene4969 SustainPine v1.1 573
AutoFact: YTH domain containing protein 7.0e-19
FL-Next: sp=Cleavage and polyadenylation specificity factor CPSF30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene4980 SustainPine v1.1 779
AutoFact: CDF1; CDF1 (CELL GROWTH DEFECT FACTOR 1) 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at5g23040 myj24_3 0.0
N-terminus
sp_v1.1_unigene5001 SustainPine v1.1 1714
AutoFact: MYB20; MYB20 (myb domain protein 20); DNA binding / transcription factor; K09422 myb proto-oncogene protein, plant 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB1; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: myb-related transcription factor 0.0
Complete
sp_v1.1_unigene5005 SustainPine v1.1 2442
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Putative Complete
sp_v1.1_unigene5041 SustainPine v1.1 732
AutoFact: DNA binding protein, putative 5.0e-37
FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 5.35292e-38
C-terminus
sp_v1.1_unigene5139 SustainPine v1.1 301
AutoFact: zinc finger (MYND type) family protein / F-box family protein 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 1.35038e-26
C-terminus
sp_v1.1_unigene5146 SustainPine v1.1 836
AutoFact: Rab family protein 3.0e-13
FL-Next: sp=Uncharacterized GTP-binding protein At5g64813; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gtp-binding protein 2.29764e-17
C-terminus
sp_v1.1_unigene5216 SustainPine v1.1 2578
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene5277 SustainPine v1.1 1887
AutoFact: protein phosphatase 2c, putative (EC:3.1.3.16) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
Putative Complete
sp_v1.1_unigene5346 SustainPine v1.1 689
AutoFact: DnaJ-like protein (Fragment) n=2 Tax=Phaseoleae RepID=P93499_PHAVU 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dnaj heat shock n-terminal domain-containing protein 0.0
N-terminus
sp_v1.1_unigene5361 SustainPine v1.1 618
AutoFact: pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] gb|AAK32830.1|AF361817_1 At1g06730/F4H5_22 [Arabidopsis thaliana] 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene5372 SustainPine v1.1 1348
AutoFact: ARP1504; actin-related protein Arp5; K11672 actin-related protein 5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein arp5 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain