Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene4132 SustainPine v1.1 1005
• AutoFact: PCFS4; PCFS4 (PCF11P-SIMILAR PROTEIN 4); zinc ion binding 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 2.77084e-13
C-terminus
sp_v1.1_unigene4161 SustainPine v1.1 1337
• AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SX16_RICCO 0.0
• FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Hordeum vulgare (Barley). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene4191 SustainPine v1.1 2462
• AutoFact: GTP-binding protein alpha subunit, gna, putative n=1 Tax=Ricinus communis RepID=B9RZ26_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding protein alpha 0.0
Complete
sp_v1.1_unigene4280 SustainPine v1.1 268
• AutoFact: BTB/POZ domain-containing protein KCTD9, putative n=1 Tax=Ricinus communis RepID=B9SI86_RICCO 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 8.1983e-32
N-terminus
sp_v1.1_unigene4334 SustainPine v1.1 1687
• AutoFact: BCAS2 protein; K12861 pre-mRNA-splicing factor SPF27 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bcas2 protein 0.0
Complete
sp_v1.1_unigene4385 SustainPine v1.1 2429
• AutoFact: actin-related protein 2/3 complex subunit 1B; K05757 actin related protein 2/3 complex, subunit 1A/1B 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arp2 3 protein complex subunit p41 0.0
Complete
sp_v1.1_unigene4414 SustainPine v1.1 533
• AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: global transcription factor group 1.09113e-30
Internal
sp_v1.1_unigene4416 SustainPine v1.1 1201
• AutoFact: TRN1; TRN1 (TORNADO 1) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene4423 SustainPine v1.1 3078
• AutoFact: EIN3-binding F-box protein 1 n=1 Tax=Solanum lycopersicum RepID=Q2PQJ0_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ein3-binding f-box protein 1 0.0
Complete
sp_v1.1_unigene4446 SustainPine v1.1 510
• AutoFact: DUF1981 domain containing protein 5.0e-31
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene4487 SustainPine v1.1 710
• AutoFact: Heat shock factor protein HSF8, putative 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock factor protein 1.13534e-16
Putative N-terminus
sp_v1.1_unigene4506 SustainPine v1.1 282
• AutoFact: Poly [ADP-ribose] polymerase 2 n=2 Tax=Arabidopsis RepID=PARP2_ARATH 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly(adp-ribose) polymerase 2.26555e-26
Internal
sp_v1.1_unigene4516 SustainPine v1.1 1297
• AutoFact: electron carrier/ oxidoreductase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene4525 SustainPine v1.1 1316
• AutoFact: AAA-type ATPase family protein; K07478 putative ATPase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: aaa-type atpase family protein 0.0
C-terminus
sp_v1.1_unigene4529 SustainPine v1.1 1376
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene4609 SustainPine v1.1 1197
• AutoFact: histone acetyltransferase type B catalytic subunit, putative (EC:2.3.1.48); K11303 histone acetyltransferase 1 [EC:2.3.1.48] 0.0
• FL-Next: sp=Probable acetyltransferase type B catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: histone acetyltransferase hat b 0.0
N-terminus
sp_v1.1_unigene4630 SustainPine v1.1 767
• AutoFact: Class III homeodomain-leucine zipper n=2 Tax=Psilotum nudum RepID=Q1WD31_PSINU 8.0e-24
• FL-Next: tr=Class III homeodomain-leucine zipper; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Blast2go: class iii homeodomain-leucine zipper 9.64812e-25
N-terminus
sp_v1.1_unigene4640 SustainPine v1.1 937
• AutoFact: DNA damage-binding protein, putative; K10140 DNA damage-binding protein 2 0.0
• FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uv-damaged dna binding protein 2 0.0
C-terminus
sp_v1.1_unigene4666 SustainPine v1.1 1732
• AutoFact: DNA double-strand break repair rad50 ATPase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear matrix constituent protein 1-like 0.0
Putative Complete
sp_v1.1_unigene4699 SustainPine v1.1 1327
• AutoFact: Clathrin assembly protein, putative n=1 Tax=Ricinus communis RepID=B9RP36_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: clathrin assembly 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain