Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene89911 SustainPine v1.1 638
AutoFact: nucleic acid binding 1.0e-39
FL-Next: sp=Uncharacterized protein At2g34160; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene89983 SustainPine v1.1 708
AutoFact: Pseudo response regulator n=1 Tax=Populus trichocarpa RepID=B9N4C8_POPTR 5.00264e-43
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: timing of cab expression 1 2.34017e-43
Putative Complete
sp_v1.1_unigene90234 SustainPine v1.1 287
AutoFact: Glutamate decarboxylase n=2 Tax=Pinaceae RepID=A0EJ89_PINPS 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate decarboxylase 2.86706e-24
Internal
sp_v1.1_unigene90417 SustainPine v1.1 509
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RR65_RICCO 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
N-terminus
sp_v1.1_unigene90488 SustainPine v1.1 859
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative; K03253 translation initiation factor eIF-3 subunit 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 0.0
Putative C-terminus
sp_v1.1_unigene90586 SustainPine v1.1 301
AutoFact: similar to remorin family protein 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.68664e-17
C-terminus
sp_v1.1_unigene90700 SustainPine v1.1 791
AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
FL-Next: Isoform Short of U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 0.0
Blast2go: u1 snrnp 70k protein 0.0
Putative C-terminus
sp_v1.1_unigene90907 SustainPine v1.1 365
AutoFact: Putative U1 small nuclear ribonucleoprotein n=3 Tax=Oryza sativa RepID=Q94LP1_ORYSJ 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 snrnp 70k protein 1.341e-18
N-terminus
sp_v1.1_unigene91080 SustainPine v1.1 761
AutoFact: Putative U2 snRNP auxiliary factor (Fragment) n=1 Tax=Chenopodium rubrum RepID=Q1H8Q9_CHERU 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 1.19998e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain