Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2926 SustainPine v1.1 1329
AutoFact: Polyketide_cyc2 domain containing protein 5.0e-12
FL-Next: sp=Abscisic acid receptor PYL8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene2969 SustainPine v1.1 1139
AutoFact: DNA damage-binding protein, putative; K10140 DNA damage-binding protein 2 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna damage-binding 0.0
N-terminus
sp_v1.1_unigene2995 SustainPine v1.1 777
AutoFact: zinc finger (CCCH-type) family protein 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccch-type zinc finger protein 4.60281e-38
Internal
sp_v1.1_unigene3064 SustainPine v1.1 1992
AutoFact: COP1-interacting protein 7 (CIP7)-like n=1 Tax=Arabidopsis thaliana RepID=Q9LJG9_ARATH 2.0e-30
FL-Next: tr=Uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cop1-interacting protein 7 1.21419e-37
N-terminus
sp_v1.1_unigene3078 SustainPine v1.1 1857
AutoFact: Os12g0256300 protein n=4 Tax=Oryza sativa RepID=Q2QUQ9_ORYSJ 0.0
FL-Next: tr=Putative pre-mRNA-splicing factor cwc-22; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: pre-mrna-splicing factor cwc-22 0.0
Putative C-terminus
sp_v1.1_unigene3088 SustainPine v1.1 2954
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q7XA22_SOLBU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpl protein binding protein homodimerization transcription repressor 0.0
Complete
sp_v1.1_unigene3148 SustainPine v1.1 1009
AutoFact: SNI1; SNI1; transcription repressor 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sni1 transcription repressor 0.0
C-terminus
sp_v1.1_unigene3189 SustainPine v1.1 1603
AutoFact: CONSTANS interacting protein 2a n=1 Tax=Solanum lycopersicum RepID=Q2VY18_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-binding transcription 0.0
Complete
sp_v1.1_unigene3197 SustainPine v1.1 1013
AutoFact: nufip1, MGC154944, nufip; nuclear fragile X mental retardation protein interacting protein 1 6.0e-14
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nuclear fragile x mental retardation protein interacting protein 1 6.19253e-37
Internal
sp_v1.1_unigene3219 SustainPine v1.1 859
AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative; K13155 U11/U12 small nuclear ribonucleoprotein 35 kDa protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 0.0
Putative Complete
sp_v1.1_unigene3220 SustainPine v1.1 905
AutoFact: acyltransferase, putative; K13510 lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [EC:2.3.1.23 2.3.1.67] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene3230 SustainPine v1.1 1675
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene3371 SustainPine v1.1 929
AutoFact: HDA906; histone deacetylase; K11407 histone deacetylase 6/10 [EC:3.5.1.98] 2.0e-33
FL-Next: sp=Histone deacetylase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 1.66321e-33
C-terminus
sp_v1.1_unigene3396 SustainPine v1.1 1020
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RYP2_RICCO 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.02695e-27
C-terminus
sp_v1.1_unigene3410 SustainPine v1.1 672
AutoFact: AMP deaminase, putative n=1 Tax=Ricinus communis RepID=B9T1I5_RICCO 0.0
FL-Next: sp=AMP deaminase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: amp deaminase 0.0
Internal
sp_v1.1_unigene3419 SustainPine v1.1 1368
AutoFact: Histidine kinase n=2 Tax=Oryza sativa RepID=Q5SML4_ORYSJ 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine kinase 1 3.16518e-39
Putative Complete
sp_v1.1_unigene3439 SustainPine v1.1 2353
AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: u1 snrnp 70k protein 0.0
Complete
sp_v1.1_unigene3505 SustainPine v1.1 2366
AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
FL-Next: sp=DNA topoisomerase 6 subunit A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: meiotic recombination protein 0.0
Complete
sp_v1.1_unigene3534 SustainPine v1.1 616
AutoFact: PREDICTED: similar to FIO1 (FIONA1) n=1 Tax=Vitis vinifera RepID=UPI0001982DB3 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: ribosomal rna large subunit methyltransferase f 2.28717e-32
Putative C-terminus
sp_v1.1_unigene3588 SustainPine v1.1 2207
AutoFact: Carbon catabolite repressor protein, putative n=1 Tax=Ricinus communis RepID=B9RMY1_RICCO 0.0
FL-Next: sp=Uncharacterized calcium-binding protein At1g02270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: carbon catabolite repressor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain