Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene1139 SustainPine v1.1 1174
• AutoFact: YDG_SRA domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene1143 SustainPine v1.1 1617
• AutoFact: [B] COG5034 Chromatin remodeling protein, contains PhD zinc finger 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phd finger 0.0
Complete
sp_v1.1_unigene1164 SustainPine v1.1 1075
• AutoFact: 5'->3' exoribonuclease, putative; K12619 5'-3' exoribonuclease 2 [EC:3.1.13.-] 0.0
• FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: 5 - 0.0
Internal
sp_v1.1_unigene1209 SustainPine v1.1 1046
• AutoFact: Polcalcin Jun o, putative n=1 Tax=Ricinus communis RepID=B9SJ25_RICCO 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: calmodulin-related protein 3.54585e-35
Complete
sp_v1.1_unigene1260 SustainPine v1.1 1800
• AutoFact: NAC domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJA4_MALDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: nac domain ipr003441 0.0
Complete
sp_v1.1_unigene1261 SustainPine v1.1 1285
• AutoFact: Polcalcin Jun o, putative (EC:1.3.1.74); K13448 calcium-binding protein CML 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polcalcin jun o 2 2.52234e-44
Putative Complete
sp_v1.1_unigene1311 SustainPine v1.1 1128
• AutoFact: N-acetyltransferase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atnsi (nuclear shuttle interacting) n-acetyltransferase 0.0
Complete
sp_v1.1_unigene1316 SustainPine v1.1 1272
• AutoFact: PUB13 (PLANT U-BOX 13); ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box domain-containing protein 13; AltName: Full=Plant U-box protein 13 emb|CAB62321.1| arm repeat containing protein homolog [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub13 0.0
Internal
sp_v1.1_unigene1326 SustainPine v1.1 3798
• AutoFact: nucleic acid binding protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleic acid binding 0.0
Complete
sp_v1.1_unigene1334 SustainPine v1.1 1047
• AutoFact: ARO1-like protein 1 n=1 Tax=Vitis vinifera RepID=A5AQH2_VITVI 0.0
• FL-Next: tr=ARO1-like protein 1; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene1341 SustainPine v1.1 1353
• AutoFact: homeobox protein knotted-1, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: knat3 homeodomain protein 0.0
C-terminus
sp_v1.1_unigene1356 SustainPine v1.1 1694
• AutoFact: kif4, putative; K10393 kinesin family member 2/24 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: by-2 kinesin-like protein 10 0.0
C-terminus
sp_v1.1_unigene1384 SustainPine v1.1 1078
• AutoFact: Pre-rRNA-processing protein ESF1, putative 0.0
• FL-Next: tr=Pre-rRNA-processing protein ESF1, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: pre-rrna-processing protein 0.0
Putative C-terminus
sp_v1.1_unigene1391 SustainPine v1.1 2228
• AutoFact: DPa; transcription factor DP, E2 dimerization partner protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor e2 dimerization partner protein 0.0
Putative Complete
sp_v1.1_unigene1398 SustainPine v1.1 2873
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SQ20_VITVI 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin-specific protease 24 0.0
Complete
sp_v1.1_unigene1454 SustainPine v1.1 2320
• AutoFact: AT-GTL1 (GT2-LIKE 1); DNA binding / transcription factor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene1508 SustainPine v1.1 2369
• AutoFact: ATK1; ATK1 (ARABIDOPSIS THALIANA KINESIN 1); microtubule motor/ minus-end-directed microtubule motor; K10405 kinesin family member C1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene1589 SustainPine v1.1 1258
• AutoFact: DUF367 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: possible metal-binding domain in rnase l rli family expressed 0.0
Complete
sp_v1.1_unigene1651 SustainPine v1.1 785
• AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: set domain protein 0.0
Internal
sp_v1.1_unigene1680 SustainPine v1.1 1817
• AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RP51_RICCO 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna-dependent rna polymerase 6 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain