Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: [R] COG0724 RNA-binding proteins (RRM domain)

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2792 SustainPine v3.0 2249
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: ALY protein 1.887e-16
Complete
sp_v3.0_unigene7248 SustainPine v3.0 1513
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene7679 SustainPine v3.0 1881
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CID11 3.492e-16
Complete
sp_v3.0_unigene10320 SustainPine v3.0 1381
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA and export factor binding protein, putative 3.345e-16
Complete
sp_v3.0_unigene10510 SustainPine v3.0 1458
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA and export factor binding protein, putative 3.345e-16
Complete
sp_v3.0_unigene11253 SustainPine v3.0 1315
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11807 SustainPine v3.0 1077
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17648 SustainPine v3.0 1831
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene29197 SustainPine v3.0 659
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Volvox carteri (Green alga). 0.0
Complete
sp_v3.0_unigene29504 SustainPine v3.0 1157
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
• FL-Next: sp=Glycine-rich RNA-binding protein; Daucus carota (Carrot). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30114 SustainPine v3.0 1261
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30767 SustainPine v3.0 3777
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA and export factor binding protein, putative 3.11e-16
Complete
sp_v3.0_unigene35045 SustainPine v3.0 673
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid-specific 30S ribosomal protein 2 9.67e-09
Putative N-terminus
sp_v3.0_unigene37535 SustainPine v3.0 814
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid-specific 30S ribosomal protein 2 6.635e-09
C-terminus
sp_v3.0_unigene53639 SustainPine v3.0 421
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene77069 SustainPine v3.0 310
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene97293 SustainPine v3.0 508
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AML1 2.457e-14
Internal
sp_v3.0_unigene127395 SustainPine v3.0 2062
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 9.0e-06
• FL-Next: sp=Nucleolin 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative C-terminus
sp_v3.0_unigene129964 SustainPine v3.0 481
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CID11 2.888e-16
Internal
sp_v3.0_unigene134064 SustainPine v3.0 347
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain