Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene823 SustainPine v3.0 2075
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13030 SustainPine v3.0 2005
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.219e-09
Putative Complete
sp_v3.0_unigene15066 SustainPine v3.0 1854
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene80732 SustainPine v3.0 394
• AutoFact: ATP-dependent RNA helicase FAL1 [Coprinopsis cinerea okayama7#130] gb|EAU84657.1| ATP-dependent RNA helicase FAL1 [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 9.996e-12
Internal
sp_v3.0_unigene154437 SustainPine v3.0 508
• AutoFact: DEAD box ATP-dependent RNA helicase n=1 Tax=Culex quinquefasciatus RepID=B0XJH6_CULQU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.058e-11
C-terminus
sp_v3.0_unigene157304 SustainPine v3.0 302
• AutoFact: ATP-dependent helicase, putative n=2 Tax=Sarcocystidae RepID=B9PLI2_TOXGO 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA helicase 0.0
C-terminus
sp_v3.0_unigene157425 SustainPine v3.0 448
• AutoFact: eukaryotic initiation factor 4A-III [Danio rerio] sp|Q7ZVA6.1|IF4A3_DANRE RecName: Full=Eukaryotic initiation factor 4A-III; Short=eIF-4A-III; Short=eIF4A-III; AltName: Full=ATP-dependent RNA helicase DDX48; AltName: Full=ATP-dependent RNA helicase eIF4A- 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.053e-09
C-terminus
sp_v3.0_unigene158677 SustainPine v3.0 397
• AutoFact: PREDICTED: eukaryotic translation initiation factor 4A-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC11C 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.182e-11
C-terminus
sp_v3.0_unigene191246 SustainPine v3.0 483
• AutoFact: Eukaryotic initiation factor 4A-III, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0N6A8_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.282e-09
C-terminus
sp_v3.0_unigene192582 SustainPine v3.0 493
• AutoFact: PREDICTED: eukaryotic initiation factor 4A-III-like isoform 1 [Apis mellifera] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.805e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain