Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: nucleobase ascorbate transporter [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene830 SustainPine v3.0 2015
AutoFact: pfam00860, Xan_ur_permease, Permease family 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleobase ascorbate transporter 9.039e-11
N-terminus
sp_v3.0_unigene2958 SustainPine v3.0 2114
AutoFact: nucleobase-ascorbate transporter 12 [Arabidopsis thaliana] sp|Q3E7D0.3|NAT12_ARATH RecName: Full=Nucleobase-ascorbate transporter 12; Short=AtNAT12 gb|AAM20397.1| putative membrane transporter [Arabidopsis thaliana] gb|AAN72132.1| putative membrane transp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleobase ascorbate transporter 8.625e-11
C-terminus
sp_v3.0_unigene5546 SustainPine v3.0 2753
AutoFact: nucleobase-ascorbate transporter 12 [Arabidopsis thaliana] sp|Q3E7D0.3|NAT12_ARATH RecName: Full=Nucleobase-ascorbate transporter 12; Short=AtNAT12 gb|AAM20397.1| putative membrane transporter [Arabidopsis thaliana] gb|AAN72132.1| putative membrane transp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr6 scaffold_25, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene105979 SustainPine v3.0 220
AutoFact: nucleobase-ascorbate transporter 11 [Arabidopsis thaliana] sp|Q6SZ87.1|NAT11_ARATH RecName: Full=Nucleobase-ascorbate transporter 11; Short=AtNAT11 gb|AAR18373.1| nucleobase-ascorbate transporter 11 [Arabidopsis thaliana] gb|AEE86867.1| nucleobase-ascorba 3.0e-08
FL-Next: sp=Nucleobase-ascorbate transporter 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleobase ascorbate transporter 4.211e-11
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain