Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1898 SustainPine v3.0 1306
• AutoFact: 40S ribosomal protein S5-1 [Arabidopsis thaliana] ref|NP_001031502.1| 40S ribosomal protein S5-1 [Arabidopsis thaliana] sp|Q9ZUT9.1|RS51_ARATH RecName: Full=40S ribosomal protein S5-1 gb|AAC98068.1| 40S ribosomal protein S5 [Arabidopsis thaliana] gb|AAL24 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18662 SustainPine v3.0 531
• AutoFact: RecName: Full=40S ribosomal protein S5 emb|CAA06491.1| 40S ribosomal protein S5 [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.027e-24
N-terminus
sp_v3.0_unigene19251 SustainPine v3.0 1093
• AutoFact: 40S ribosomal protein S5-1 [Arabidopsis thaliana] ref|NP_001031502.1| 40S ribosomal protein S5-1 [Arabidopsis thaliana] sp|Q9ZUT9.1|RS51_ARATH RecName: Full=40S ribosomal protein S5-1 gb|AAC98068.1| 40S ribosomal protein S5 [Arabidopsis thaliana] gb|AAL24 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23120 SustainPine v3.0 720
• AutoFact: Ribosomal protein S5 n=2 Tax=Chlamydomonadales RepID=A8J2I5_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 2.11e-21
Complete
sp_v3.0_unigene28050 SustainPine v3.0 664
• AutoFact: 40S ribosomal protein S5 n=1 Tax=Lycosa singoriensis RepID=A9QQA8_LYCSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.535e-21
Complete
sp_v3.0_unigene30333 SustainPine v3.0 1144
• AutoFact: 40S ribosomal protein S5-1 [Arabidopsis thaliana] ref|NP_001031502.1| 40S ribosomal protein S5-1 [Arabidopsis thaliana] sp|Q9ZUT9.1|RS51_ARATH RecName: Full=40S ribosomal protein S5-1 gb|AAC98068.1| 40S ribosomal protein S5 [Arabidopsis thaliana] gb|AAL24 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene131370 SustainPine v3.0 286
• AutoFact: 40S ribosomal protein S5-1 n=4 Tax=Arabidopsis RepID=RS51_ARATH 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 4.62e-21
N-terminus
sp_v3.0_unigene153517 SustainPine v3.0 404
• AutoFact: 40S ribosomal protein S5 n=1 Tax=Capsicum annuum RepID=Q6RH11_CAPAN 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 9.533e-22
C-terminus
sp_v3.0_unigene163204 SustainPine v3.0 283
• AutoFact: 40S ribosomal protein S5 [Chlamydomonas sp. ICE-L] 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 4.62e-21
N-terminus
sp_v3.0_unigene188917 SustainPine v3.0 544
• AutoFact: ribosomal protein S5a [Drosophila melanogaster] ref|XP_001977532.1| GG18202 [Drosophila erecta] ref|XP_002042347.1| GM13336 [Drosophila sechellia] ref|XP_002101460.1| GE15619 [Drosophila yakuba] sp|Q24186.1|RS5A_DROME RecName: Full=40S ribosomal protein S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.135e-21
Putative C-terminus
sp_v3.0_unigene204451 SustainPine v3.0 595
• AutoFact: RecName: Full=40S ribosomal protein S5 emb|CAA06491.1| 40S ribosomal protein S5 [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.535e-21
Putative Complete
sp_v3.0_unigene206978 SustainPine v3.0 694
• AutoFact: 40S ribosomal protein S5-2 [Arabidopsis thaliana] ref|NP_850564.1| 40S ribosomal protein S5-2 [Arabidopsis thaliana] ref|XP_002884873.1| ATRPS5A [Arabidopsis lyrata subsp. lyrata] sp|P51427.2|RS52_ARATH RecName: Full=40S ribosomal protein S5-2 gb|AAF23210 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 0.0
Complete
sp_v3.0_unigene209316 SustainPine v3.0 473
• AutoFact: Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare RepID=F2DGG3_HORVD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 7.622e-25
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain