Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AP2 domain-containing transcription factor [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene34155 SustainPine v3.0 1883
AutoFact: putative RAV2-like DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=APETALA2-like protein 2; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 5.668e-08
Complete
sp_v3.0_unigene75657 SustainPine v3.0 361
AutoFact: DNA-binding protein RAV1, putative n=1 Tax=Ricinus communis RepID=B9SEJ0_RICCO 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 1.575e-08
Internal
sp_v3.0_unigene77785 SustainPine v3.0 322
AutoFact: B3 domain-containing transcription factor NGA1 [Arabidopsis thaliana] sp|O82799.1|NGA1_ARATH RecName: Full=B3 domain-containing transcription factor NGA1; AltName: Full=Protein NGATHA 1 gb|AAC34233.1| putative RAV-like B3 domain DNA binding protein [Arabi 4.0e-35
FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
Sma3: AP2 domain-containing transcription factor 3.324e-10
Internal
sp_v3.0_unigene78885 SustainPine v3.0 402
AutoFact: B3 domain-containing transcription factor NGA1 n=5 Tax=Arabidopsis RepID=NGA1_ARATH 7.0e-19
FL-Next: sp=B3 domain-containing transcription factor NGA3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 5.058e-08
Internal
sp_v3.0_unigene96856 SustainPine v3.0 708
AutoFact: RAV transcription factor n=2 Tax=Capsicum annuum RepID=Q4G3H5_CAPAN 4.0e-17
FL-Next: sp=B3 domain-containing protein Os03g0120900; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 3.493e-08
C-terminus
sp_v3.0_unigene149693 SustainPine v3.0 462
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK07_9ASPA 1.0e-21
FL-Next: sp=AP2/ERF and B3 domain-containing transcription factor RAV1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 2.102e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain