Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1665 SustainPine v3.0 1273
• AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 1.426e-09
C-terminus
sp_v3.0_unigene3277 SustainPine v3.0 666
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana] 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 7.054e-10
Internal
sp_v3.0_unigene48054 SustainPine v3.0 665
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana] 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 5.586e-10
Internal
sp_v3.0_unigene51629 SustainPine v3.0 434
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana] 3.0e-28
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cleavage and polyadenylation specificity factor cpsf, putative 6.823e-06
Internal
sp_v3.0_unigene56328 SustainPine v3.0 484
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana] 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 7.054e-10
Internal
sp_v3.0_unigene64994 SustainPine v3.0 242
• AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group] 3.0e-17
• FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 5.586e-10
Internal
sp_v3.0_unigene71753 SustainPine v3.0 159
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana] 1.0e-10
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene98724 SustainPine v3.0 1022
• AutoFact: Cleavage and polyadenylation specificity factor subunit 1 n=2 Tax=Arabidopsis RepID=CPSF1_ARATH 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 1.656e-09
Internal
sp_v3.0_unigene108984 SustainPine v3.0 424
• AutoFact: cleavage and polyadenylation specificity factor subunit [Arabidopsis thaliana] 2.0e-28
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 7.054e-10
Internal
sp_v3.0_unigene122167 SustainPine v3.0 440
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana] 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 8.982e-10
Internal
sp_v3.0_unigene123926 SustainPine v3.0 302
• AutoFact: Cleavage and polyadenylation specificity factor subunit 1 n=2 Tax=Arabidopsis RepID=CPSF1_ARATH 3.0e-30
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 1.248e-09
Internal
sp_v3.0_unigene133985 SustainPine v3.0 269
• AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group] 3.0e-16
• FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 7.054e-10
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain