Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene74283 SustainPine v3.0 421
AutoFact: 40S ribosomal protein S12 n=5 Tax=Agaricomycetes RepID=B8PIM8_POSPM 0.0
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
C-terminus
sp_v3.0_unigene116539 SustainPine v3.0 434
AutoFact: 40S ribosomal protein S12 n=2 Tax=Ustilaginaceae RepID=E6ZU23_9BASI 2.0e-40
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 1.092e-39
C-terminus
sp_v3.0_unigene151605 SustainPine v3.0 282
AutoFact: 40S ribosomal protein S12 n=1 Tax=Perinereis aibuhitensis RepID=Q86PL3_PERAI 3.0e-26
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 2.442e-08
Internal
sp_v3.0_unigene152179 SustainPine v3.0 255
AutoFact: 40S ribosomal protein S12 n=1 Tax=Chlorella variabilis RepID=E1ZI38_9CHLO 5.0e-32
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
N-terminus
sp_v3.0_unigene156260 SustainPine v3.0 295
AutoFact: PREDICTED: similar to 40S ribosomal protein n=1 Tax=Ciona intestinalis RepID=UPI000180C8EC 8.0e-22
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 6.006e-30
N-terminus
sp_v3.0_unigene157057 SustainPine v3.0 368
AutoFact: 40S ribosomal protein S12 n=11 Tax=sordariomyceta RepID=A4R8G8_MAGO7 0.0
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Putative Complete
sp_v3.0_unigene159860 SustainPine v3.0 483
AutoFact: 40S ribosomal protein S12 n=1 Tax=Eurythoe complanata RepID=A8UFV4_EURCO 3.9937e-43
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain