Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4225 SustainPine v3.0 3818
AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene6877 SustainPine v3.0 1682
AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome regulatory complex component protein 9.17e-09
N-terminus
sp_v3.0_unigene11194 SustainPine v3.0 2298
AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 2.063e-12
C-terminus
sp_v3.0_unigene34964 SustainPine v3.0 1114
AutoFact: 26S proteasome subunit RPN2a [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 3.376e-09
Internal
sp_v3.0_unigene51693 SustainPine v3.0 1112
AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 1.208e-09
Putative C-terminus
sp_v3.0_unigene62287 SustainPine v3.0 169
AutoFact: 26S proteasome subunit RPN2a [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 2.111e-06
Internal
sp_v3.0_unigene68358 SustainPine v3.0 335
AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 8.0e-09
FL-Next: tr=Os08g0224700 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene75965 SustainPine v3.0 417
AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAF40455.1|AC004809_13 Strong similarity to the SEN3-like tRNA-processing protein F24L7.13 from A. thaliana gi|2914700 on BAC gb|AC003974. EST gb|AA712969 comes from this gene [Arabidopsis tha 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene78822 SustainPine v3.0 219
AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 7.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene137671 SustainPine v3.0 251
AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 1.84e-06
Internal
sp_v3.0_unigene138083 SustainPine v3.0 359
AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome regulatory complex component protein 9.077e-09
Internal
sp_v3.0_unigene144188 SustainPine v3.0 948
AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 2.127e-09
Putative C-terminus
sp_v3.0_unigene152246 SustainPine v3.0 453
AutoFact: PREDICTED: 26S proteasome non-ATPase regulatory subunit 1-like isoform 1 n=1 Tax=Acyrthosiphon pisum RepID=UPI0002061F0B 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 2.028e-09
Internal
sp_v3.0_unigene155027 SustainPine v3.0 353
AutoFact: Putative 26S proteasome subunit RPN2a n=1 Tax=Capsicum chinense RepID=B1Q487_CAPCH 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome regulatory complex component protein 9.453e-09
Internal
sp_v3.0_unigene201706 SustainPine v3.0 275
AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome regulatory complex component protein 7.483e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain