Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene25664 SustainPine v3.0 523
AutoFact: 40S ribosomal protein S4 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NM53_PHYIT 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 2.176e-20
C-terminus
sp_v3.0_unigene26217 SustainPine v3.0 550
AutoFact: ribosomal protein S4e [Biphyllus lunatus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 4.456e-24
N-terminus
sp_v3.0_unigene81375 SustainPine v3.0 128
AutoFact: 40s ribosomal protein s4, putative [Toxoplasma gondii RH] 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.858e-17
Internal
sp_v3.0_unigene144244 SustainPine v3.0 632
AutoFact: 40S ribosomal protein S4-3 [Arabidopsis thaliana] sp|Q8VYK6.2|RS43_ARATH RecName: Full=40S ribosomal protein S4-3 gb|AAL16117.1|AF428285_1 AT5g58420/mqj2_10 [Arabidopsis thaliana] gb|AAM64284.1| ribosomal protein S4-like [Arabidopsis thaliana] gb|AED97051 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 4.052e-24
C-terminus
sp_v3.0_unigene152390 SustainPine v3.0 461
AutoFact: 40S ribosomal protein S4 n=2 Tax=Ixodoidea RepID=RS4_IXOSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 4.563e-24
C-terminus
sp_v3.0_unigene154097 SustainPine v3.0 200
AutoFact: 40S ribosomal protein S4 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BY76_9EUKA 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene154274 SustainPine v3.0 274
AutoFact: Putative ribosomal protein S4 (Fragment) n=1 Tax=Barentsia elongata RepID=A8UAC7_9BILA 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 5.305e-11
C-terminus
sp_v3.0_unigene154545 SustainPine v3.0 118
AutoFact: 40S ribosomal protein S4 n=12 Tax=rosids RepID=RS4_GOSHI 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 4.755e-17
N-terminus
sp_v3.0_unigene154752 SustainPine v3.0 472
AutoFact: PREDICTED: 40S ribosomal protein S4-like n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791CA4 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 1.092e-20
Internal
sp_v3.0_unigene155093 SustainPine v3.0 237
AutoFact: 40S ribosomal protein S4 n=1 Tax=Dictyostelium discoideum RepID=RS4_DICDI 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene155689 SustainPine v3.0 372
AutoFact: 40S ribosomal protein S4, X isoform, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LEI2_9ALVE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene156512 SustainPine v3.0 320
AutoFact: 40S ribosomal protein S4 n=1 Tax=Dictyostelium discoideum RepID=RS4_DICDI 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene158655 SustainPine v3.0 198
AutoFact: [J] COG1471 Ribosomal protein S4E 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene158843 SustainPine v3.0 249
AutoFact: Ribosomal protein S4, component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S956_OSTLU 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene164476 SustainPine v3.0 219
AutoFact: ribosomal protein S4e [Lygus lineolaris] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 1.315e-20
N-terminus
sp_v3.0_unigene183376 SustainPine v3.0 676
AutoFact: 40S ribosomal protein S4 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WD75_9STRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 2.043e-20
C-terminus
sp_v3.0_unigene186624 SustainPine v3.0 461
AutoFact: 40S ribosomal protein S4 n=2 Tax=Ixodoidea RepID=RS4_IXOSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 4.456e-24
Internal
sp_v3.0_unigene189509 SustainPine v3.0 514
AutoFact: Putative ribosomal protein S4 (Fragment) n=1 Tax=Barentsia elongata RepID=A8UAC7_9BILA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S4 4.563e-24
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain