Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: s-adenosylmethionine synthetase 1 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3028 SustainPine v3.0 933
AutoFact: S-adenosylmethionine synthase 1 (Fragment) n=2 Tax=Magnoliophyta RepID=METK1_PETCR 0.0
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: S-adenosylmethionine synthetase 6.455e-40
C-terminus
sp_v3.0_unigene18505 SustainPine v3.0 1031
AutoFact: S-adenosylmethionine synthase 2 (Fragment) n=3 Tax=core eudicotyledons RepID=METK2_PETCR 5.0e-35
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: S-adenosylmethionine synthetase 8.296e-34
Misassembled
sp_v3.0_unigene51404 SustainPine v3.0 841
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 3.752e-31
N-terminus
sp_v3.0_unigene56917 SustainPine v3.0 388
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 9.0e-26
FL-Next: sp=S-adenosylmethionine synthase 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 6.842e-31
C-terminus
sp_v3.0_unigene61303 SustainPine v3.0 208
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 4.0e-13
FL-Next: sp=S-adenosylmethionine synthase 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 1.83e-23
C-terminus
sp_v3.0_unigene129425 SustainPine v3.0 488
AutoFact: S-adenosylmethionine synthase 1 (Fragment) n=2 Tax=Magnoliophyta RepID=METK1_PETCR 0.0
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: S-adenosylmethionine synthetase 2.51701e-41
C-terminus
sp_v3.0_unigene140885 SustainPine v3.0 364
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: S-adenosylmethionine synthetase 2.077e-41
Putative C-terminus
sp_v3.0_unigene141526 SustainPine v3.0 219
AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Salvia miltiorrhiza RepID=Q84RM7_SALMI 5.0e-18
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: AdoMet synthetase 2 5.378e-21
Internal
sp_v3.0_unigene155423 SustainPine v3.0 491
AutoFact: S-adenosylmethionine synthase n=1 Tax=Amoeba proteus RepID=METK_AMOPR 0.0
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: S-adenosylmethionine synthetase 7.8823e-42
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain