Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1449 SustainPine v3.0 1927
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 2.346e-14
Putative Complete
sp_v3.0_unigene2660 SustainPine v3.0 1486
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 5.0e-10
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcriptional corepressor LEUNIG 1.005e-07
N-terminus
sp_v3.0_unigene66255 SustainPine v3.0 342
AutoFact: WD-repeat protein, putative (EC:2.7.11.7) 3.0e-14
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcriptional corepressor LEUNIG 5.628e-12
N-terminus
sp_v3.0_unigene74691 SustainPine v3.0 359
AutoFact: putative WD repeat protein [Oryza sativa Japonica Group] 2.0e-20
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcriptional corepressor LEUNIG 6.153e-12
N-terminus
sp_v3.0_unigene105276 SustainPine v3.0 323
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 4.0e-24
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 5.701e-10
Internal
sp_v3.0_unigene208845 SustainPine v3.0 190
AutoFact: Unassigned protein
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain