Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SET domain-containing protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7317 SustainPine v3.0 3917
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SHW2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 7.183e-15
Complete
sp_v3.0_unigene15103 SustainPine v3.0 408
AutoFact: SET domain-containing protein (Fragment) n=2 Tax=Populus trichocarpa RepID=B9HSV4_POPTR 2.0e-12
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene57148 SustainPine v3.0 404
AutoFact: SET domain-containing protein SET104 [Zea mays] gb|AAM89288.1| SET domain-containing protein SET104 [Zea mays] 4.0e-11
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene93679 SustainPine v3.0 1042
AutoFact: SET domain-containing protein (Fragment) n=2 Tax=Populus trichocarpa RepID=B9HSV4_POPTR 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone-lysine n-methyltransferase, suvh, putative 1.466e-07
Putative C-terminus
sp_v3.0_unigene108339 SustainPine v3.0 264
AutoFact: histone methyltransferase [Arabidopsis thaliana] sp|O22781.1|SUVH2_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2; AltName: Full=Cytosine-HMTase 2; AltName: Full=H3-K27-HMTase 2; 2.0e-23
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 5.82e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain