Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene30655 SustainPine v3.0 2049
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene36713 SustainPine v3.0 2229
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Ginkgo biloba RepID=Q5XQC9_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Complete
sp_v3.0_unigene37733 SustainPine v3.0 1662
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
C-terminus
sp_v3.0_unigene44773 SustainPine v3.0 244
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Ginkgo biloba RepID=Q5XQC9_GINBI 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene63414 SustainPine v3.0 181
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene74396 SustainPine v3.0 405
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene74707 SustainPine v3.0 295
• AutoFact: 3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Zea mays RepID=HMDH_MAIZE 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene74970 SustainPine v3.0 295
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene76283 SustainPine v3.0 342
• AutoFact: 3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Zea mays RepID=HMDH_MAIZE 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Misassembled
sp_v3.0_unigene97715 SustainPine v3.0 1232
• AutoFact: 3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Salvia miltiorrhiza RepID=B3V4Z5_SALMI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Putative C-terminus
sp_v3.0_unigene128030 SustainPine v3.0 725
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene136112 SustainPine v3.0 318
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene140573 SustainPine v3.0 517
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 1.4013e-45
Internal
sp_v3.0_unigene142726 SustainPine v3.0 462
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 1.648e-40
Internal
sp_v3.0_unigene165040 SustainPine v3.0 226
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Ginkgo biloba RepID=Q5XQC9_GINBI 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 1.4013e-45
Internal
sp_v3.0_unigene207771 SustainPine v3.0 572
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Ginkgo biloba RepID=Q5XQC9_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene208561 SustainPine v3.0 509
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain