Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16181 SustainPine v3.0 1084
AutoFact: Ubiquitin-conjugating enzyme 2 n=1 Tax=Elaeis guineensis RepID=B3TM02_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-conjugating enzyme 2 0.0
Complete
sp_v3.0_unigene60565 SustainPine v3.0 241
AutoFact: Ubiquitin-conjugating enzyme, putative n=1 Tax=Ricinus communis RepID=B9SJ18_RICCO 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-conjugating enzyme, putative 1.052e-08
Internal
sp_v3.0_unigene150818 SustainPine v3.0 255
AutoFact: Ubiquitin-conjugating enzyme n=4 Tax=Arthrodermataceae RepID=E4V111_ARTGP 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-conjugating enzyme, putative 1.155e-08
N-terminus
sp_v3.0_unigene151207 SustainPine v3.0 330
AutoFact: Ubiquitin-conjugating enzyme E2 variant, putative n=1 Tax=Pediculus humanus corporis RepID=E0VL63_PEDHC 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151623 SustainPine v3.0 324
AutoFact: Ubiquitin-conjugating enzyme E2 variant 2 n=5 Tax=Apocrita RepID=E2AGB3_9HYME 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152243 SustainPine v3.0 266
AutoFact: LD28904p n=14 Tax=Drosophila RepID=Q9VRL1_DROME 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene166053 SustainPine v3.0 233
AutoFact: Ubiquitin-conjugating enzyme n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NAI3_COPC7 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-conjugating enzyme, putative 1.013e-08
Putative N-terminus
sp_v3.0_unigene183081 SustainPine v3.0 525
AutoFact: ubiquitin-conjugating enzyme E2 variant 1D [Arabidopsis thaliana] sp|Q9SVD7.1|UEV1D_ARATH RecName: Full=Ubiquitin-conjugating enzyme E2 variant 1D; Short=Ubc enzyme variant 1D; AltName: Full=Protein MMS ZWEI HOMOLOG 4 emb|CAB43411.1| putative DNA-binding 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-conjugating enzyme, putative 1.306e-08
Complete
sp_v3.0_unigene191975 SustainPine v3.0 332
AutoFact: PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 189-like n=2 Tax=Sauria RepID=UPI000203971E 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-conjugating enzyme, putative 1.328e-08
N-terminus
sp_v3.0_unigene209331 SustainPine v3.0 530
AutoFact: ubiquitin-conjugating enzyme E2 variant 1D [Arabidopsis thaliana] sp|Q9SVD7.1|UEV1D_ARATH RecName: Full=Ubiquitin-conjugating enzyme E2 variant 1D; Short=Ubc enzyme variant 1D; AltName: Full=Protein MMS ZWEI HOMOLOG 4 emb|CAB43411.1| putative DNA-binding 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-conjugating enzyme, putative 1.262e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain