Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1871 SustainPine v3.0 1346
AutoFact: 60S ribosomal protein L18a n=23 Tax=Magnoliophyta RepID=RL18A_ORYSJ 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene26526 SustainPine v3.0 430
AutoFact: Ribosomal protein L18a (Fragment) n=1 Tax=Podocoryna carnea RepID=O76968_PODCA 1.0e-35
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.785e-13
C-terminus
sp_v3.0_unigene27738 SustainPine v3.0 676
AutoFact: PREDICTED: 60S ribosomal protein L18a-like [Monodelphis domestica] 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 3.108e-13
Complete
sp_v3.0_unigene31161 SustainPine v3.0 661
AutoFact: 60S ribosomal protein L18a (Fragment) n=1 Tax=Brachionus plicatilis RepID=B7FDK6_BRAPC 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.261e-13
Putative Complete
sp_v3.0_unigene31925 SustainPine v3.0 726
AutoFact: 60S ribosomal protein L18a n=2 Tax=Phytophthora infestans RepID=D0NTC7_PHYIT 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 0.0
Complete
sp_v3.0_unigene77516 SustainPine v3.0 302
AutoFact: 60S ribosomal protein L18a-1 n=2 Tax=Arabidopsis RepID=A8MRF3_ARATH 4.00001e-40
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 4.479e-13
Internal
sp_v3.0_unigene151859 SustainPine v3.0 338
AutoFact: Ribosomal L18ae protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BZ76_9EUKA 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.261e-13
Internal
sp_v3.0_unigene154192 SustainPine v3.0 414
AutoFact: 60S ribosomal protein L18a putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM08_9STRA 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 3.829e-13
Putative N-terminus
sp_v3.0_unigene154519 SustainPine v3.0 433
AutoFact: 60S ribosomal protein L18a putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM08_9STRA 1.00053e-42
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.662e-13
C-terminus
sp_v3.0_unigene154830 SustainPine v3.0 399
AutoFact: Putative ribosomal protein L18A n=1 Tax=Maconellicoccus hirsutus RepID=A2I3U8_MACHI 6.0e-38
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RL18a, ribosomal protein 18a 60S large ribosomal subunit 7.31e-06
C-terminus
sp_v3.0_unigene155157 SustainPine v3.0 354
AutoFact: ribosomal protein L18a [Artemia franciscana] 4.99983e-42
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.976e-13
N-terminus
sp_v3.0_unigene203010 SustainPine v3.0 635
AutoFact: S60 ribosomal protein L18a n=1 Tax=Polysphondylium pallidum RepID=D3B5J6_POLPA 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 3.829e-13
Complete
sp_v3.0_unigene203669 SustainPine v3.0 535
AutoFact: 60S ribosomal protein L18a n=2 Tax=Phytophthora infestans RepID=D0NTC7_PHYIT 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 4.479e-13
Putative Complete
sp_v3.0_unigene209193 SustainPine v3.0 921
AutoFact: 60S ribosomal protein L18a n=23 Tax=Magnoliophyta RepID=RL18A_ORYSJ 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain