Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: GH3 family protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1529 SustainPine v3.0 1480
AutoFact: Auxin-regulated protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCH6_CUCME 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Sma3: GH3 family protein 3.776e-17
C-terminus
sp_v3.0_unigene4020 SustainPine v3.0 976
AutoFact: putative auxin-regulated protein [Nicotiana glutinosa] 7.0e-31
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Sma3: GH3 family protein 4.828e-07
N-terminus
sp_v3.0_unigene7398 SustainPine v3.0 2438
AutoFact: pfam03321, GH3, GH3 auxin-responsive promoter 0.0
FL-Next: sp=Probable indole-3-acetic acid-amido synthetase GH3.5; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: GH3 family protein 3.032e-17
Complete
sp_v3.0_unigene11197 SustainPine v3.0 2144
AutoFact: Probable indole-3-acetic acid-amido synthetase GH3.5 n=3 Tax=Oryza sativa RepID=GH35_ORYSJ 0.0
FL-Next: sp=Probable indole-3-acetic acid-amido synthetase GH3.5; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: GH3 family protein 3.652e-14
Complete
sp_v3.0_unigene102980 SustainPine v3.0 312
AutoFact: Probable indole-3-acetic acid-amido synthetase GH3.5 n=3 Tax=Oryza sativa RepID=GH35_ORYSJ 4.0e-23
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Sma3: GH3 family protein 2.211e-16
Internal
sp_v3.0_unigene130093 SustainPine v3.0 373
AutoFact: Jasmonic acid-amino acid-conjugating enzyme n=1 Tax=Nicotiana attenuata RepID=A1BNG5_9SOLA 2.0e-14
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain