Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1503 SustainPine v3.0 1488
• AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 0.0
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
C-terminus
sp_v3.0_unigene44626 SustainPine v3.0 294
• AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 1.0e-34
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
• Sma3: Protein CHLOROPLAST RNA SPLICING 1 1.483e-12
Internal
sp_v3.0_unigene47118 SustainPine v3.0 314
• AutoFact: CRM family member 3A [Arabidopsis thaliana] gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana] 8.0e-25
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene49792 SustainPine v3.0 652
• AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 0.0
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein CHLOROPLAST RNA SPLICING 1 1.681e-12
Putative C-terminus
sp_v3.0_unigene98459 SustainPine v3.0 560
• AutoFact: CRM family member 3A [Arabidopsis thaliana] gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana] 1.0e-39
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene130551 SustainPine v3.0 488
• AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 1.0e-25
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene137337 SustainPine v3.0 273
• AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 1.0e-18
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain