Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2172 SustainPine v3.0 1527
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bi-ubiquitin 1.624e-08
Complete
sp_v3.0_unigene17026 SustainPine v3.0 1834
AutoFact: polyubiquitin [Zea mays] gb|AAB21994.1| polyubiquitin [Zea mays] gb|AAQ07454.1| ubiquitin [Musa acuminata] dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group] gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group] gb|EEE66229.1| 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.624e-08
Putative Complete
sp_v3.0_unigene17377 SustainPine v3.0 1313
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bi-ubiquitin 1.816e-08
Complete
sp_v3.0_unigene17537 SustainPine v3.0 1805
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.829e-08
Misassembled
sp_v3.0_unigene20194 SustainPine v3.0 1366
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bi-ubiquitin 1.764e-08
Complete
sp_v3.0_unigene21740 SustainPine v3.0 1197
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene21741 SustainPine v3.0 829
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.869e-08
Putative Complete
sp_v3.0_unigene32890 SustainPine v3.0 2077
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyubiquitin OUB1 0.0
Complete
sp_v3.0_unigene33042 SustainPine v3.0 1097
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Complete
sp_v3.0_unigene34780 SustainPine v3.0 1200
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene34852 SustainPine v3.0 1217
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene49602 SustainPine v3.0 1158
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.816e-08
Putative Complete
sp_v3.0_unigene126656 SustainPine v3.0 1328
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene126739 SustainPine v3.0 1328
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Complete
sp_v3.0_unigene126784 SustainPine v3.0 1277
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene142246 SustainPine v3.0 1404
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: At5g03240 0.0
Complete
sp_v3.0_unigene144146 SustainPine v3.0 1338
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.855e-08
Putative Complete
sp_v3.0_unigene146595 SustainPine v3.0 843
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.842e-08
Putative Complete
sp_v3.0_unigene147484 SustainPine v3.0 908
AutoFact: Ubiquitin family protein n=3 Tax=Tetrahymena thermophila RepID=UPI00006CC966 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.816e-08
Putative Complete
sp_v3.0_unigene147503 SustainPine v3.0 625
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.751e-08
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain