Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: histone H2, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene508 SustainPine v3.0 926
• AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 2.0e-35
• FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene18015 SustainPine v3.0 1081
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 1.96182e-44
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene18285 SustainPine v3.0 754
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 2.94273e-44
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene20917 SustainPine v3.0 966
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 9.80909e-45
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene22849 SustainPine v3.0 699
• AutoFact: PREDICTED: histone H2A-like n=2 Tax=Anolis carolinensis RepID=UPI0002038DF2 1.4013e-45
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene32581 SustainPine v3.0 728
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 1.0e-39
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene34859 SustainPine v3.0 1046
• AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 7.0e-35
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene36636 SustainPine v3.0 845
• AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 7.0e-36
• FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene151780 SustainPine v3.0 434
• AutoFact: Histone H2A (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZYM2_BRAFL 9.80909e-45
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene153031 SustainPine v3.0 377
• AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FVQ5_ECTSI 6.0e-36
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene154517 SustainPine v3.0 359
• AutoFact: Histone H2A n=2 Tax=Phytophthora infestans T30-4 RepID=D0MYS4_PHYIT 5.0e-26
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene157246 SustainPine v3.0 413
• AutoFact: Histone H2A n=1 Tax=Schizophyllum commune H4-8 RepID=D8QD52_SCHCM 1.0e-34
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene157812 SustainPine v3.0 355
• AutoFact: Histone H2A (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZYM2_BRAFL 1.0e-37
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene157870 SustainPine v3.0 366
• AutoFact: PREDICTED: histone H2A-like n=2 Tax=Anolis carolinensis RepID=UPI0002038DF2 2.0e-39
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene190109 SustainPine v3.0 438
• AutoFact: PREDICTED: histone H2A-like n=2 Tax=Anolis carolinensis RepID=UPI0002038DF2 0.0
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene207722 SustainPine v3.0 709
• AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 8.0e-25
• FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
• Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene207731 SustainPine v3.0 689
• AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 2.0e-25
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene209075 SustainPine v3.0 322
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 1.0e-15
• FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
• Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene210349 SustainPine v3.0 760
• AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 4.99997e-41
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain