Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chalcone synthase [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene40584 SustainPine v3.0 527
• AutoFact: Chalcone synthase (Fragment) n=1 Tax=Picea abies RepID=Q8RVR1_PICAB 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chalcone synthase 0.0
C-terminus
sp_v3.0_unigene60573 SustainPine v3.0 293
• AutoFact: Chalcone synthase 3 n=10 Tax=Epidendroideae RepID=CHS3_BROFI 2.0e-16
• FL-Next: tr=Chalcone synthase; Abies alba (Edeltanne) (European silver fir). 0.0
• Sma3: Chalcone synthase 0.0
Internal
sp_v3.0_unigene74491 SustainPine v3.0 355
• AutoFact: Dihydropinosylvin synthase n=6 Tax=Pinus RepID=DPSS_PINSY 6.0e-14
• FL-Next: tr=Pinosylvin synthase; Pinus densiflora (Japanese red pine). 0.0
• Sma3: Chalcone synthase 3.347e-08
Misassembled
sp_v3.0_unigene124180 SustainPine v3.0 645
• AutoFact: Chalcone synthase-like protein n=1 Tax=Pinus strobus RepID=O65873_PINST 3.0e-30
• FL-Next: tr=Pinocembrin chalcone synthase; Pinus densiflora (Japanese red pine). 0.0
• Sma3: Chalcone synthase 0.0
C-terminus
sp_v3.0_unigene130105 SustainPine v3.0 357
• AutoFact: Chalcone synthase-like protein n=1 Tax=Pinus strobus RepID=O65873_PINST 4.0e-12
• FL-Next: tr=Chalcone synthase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Chalcone synthase 0.0
C-terminus
sp_v3.0_unigene146973 SustainPine v3.0 653
• AutoFact: Chalcone synthase n=48 Tax=Polygonaceae RepID=D1MIB1_9CARY 9.99995e-41
• FL-Next: tr=Chalcone synthase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Chalcone synthase 0.0
Misassembled
sp_v3.0_unigene159944 SustainPine v3.0 286
• AutoFact: Chalcone synthase-like protein n=1 Tax=Pinus strobus RepID=O65873_PINST 3.0e-21
• FL-Next: tr=Chalcone synthase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Chalcone synthase 0.0
C-terminus
sp_v3.0_unigene167194 SustainPine v3.0 223
• AutoFact: Chalcone synthase (Fragment) n=1 Tax=Picea abies RepID=Q8RVR1_PICAB 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chalcone synthase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain