Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4622 SustainPine v3.0 241
• AutoFact: Putative 60S ribosomal protein L3 (Fragment) n=1 Tax=Prunus dulcis RepID=A7Y7Q9_PRUDU 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 8.53e-18
Internal
sp_v3.0_unigene80877 SustainPine v3.0 388
• AutoFact: L3 Ribosomal protein n=1 Tax=Medicago sativa subsp. x varia RepID=Q9SBR8_MEDSV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.342e-17
N-terminus
sp_v3.0_unigene127088 SustainPine v3.0 1013
• AutoFact: 60S ribosomal protein L3-1 [Arabidopsis thaliana] ref|NP_973966.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] ref|NP_001031146.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] ref|NP_001185148.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 8.169e-18
N-terminus
sp_v3.0_unigene144491 SustainPine v3.0 845
• AutoFact: ribosomal protein L3 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.788e-17
N-terminus
sp_v3.0_unigene145014 SustainPine v3.0 328
• AutoFact: 60S ribosomal protein L3-1 n=7 Tax=Brassicaceae RepID=RL31_ARATH 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.368e-17
Internal
sp_v3.0_unigene146088 SustainPine v3.0 622
• AutoFact: 60S ribosomal protein L3-1 n=7 Tax=Brassicaceae RepID=RL31_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.978e-21
Putative N-terminus
sp_v3.0_unigene146194 SustainPine v3.0 737
• AutoFact: L3 Ribosomal protein n=1 Tax=Medicago sativa subsp. x varia RepID=Q9SBR8_MEDSV 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 4.258e-17
Internal
sp_v3.0_unigene189765 SustainPine v3.0 540
• AutoFact: 60S ribosomal protein L3 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NY29_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 2.118e-21
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain