Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene25696 SustainPine v3.0 492
AutoFact: cofilin [Schizosaccharomyces pombe 972h-] sp|P78929.1|COFI_SCHPO RecName: Full=Cofilin; AltName: Full=Actin-depolymerizing factor 1 pdb|2I2Q|A Chain A, Fission Yeast Cofilin dbj|BAA14039.1| actin depolymerazing factor [Schizosaccharomyces pombe] emb|CAB11 8.0e-39
FL-Next: sp=Actin-depolymerizing factor 6; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin-depolymerizing factor 6.723e-08
Complete
sp_v3.0_unigene34145 SustainPine v3.0 1235
AutoFact: actin depolymerizing factor 8 [Arabidopsis thaliana] sp|Q570Y6.2|ADF8_ARATH RecName: Full=Actin-depolymerizing factor 8; Short=ADF-8; Short=AtADF8 gb|AAM63658.1| putative actin-depolymerizing factor [Arabidopsis thaliana] gb|ABD60702.1| At4g00680 [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene56013 SustainPine v3.0 328
AutoFact: RecName: Full=Actin-depolymerizing factor; Short=ADF emb|CAA78483.1| actin depolymerizing factor [Lilium longiflorum] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.927e-20
N-terminus
sp_v3.0_unigene144288 SustainPine v3.0 336
AutoFact: actin depolymerizing factor 8 [Arabidopsis thaliana] sp|Q570Y6.2|ADF8_ARATH RecName: Full=Actin-depolymerizing factor 8; Short=ADF-8; Short=AtADF8 gb|AAM63658.1| putative actin-depolymerizing factor [Arabidopsis thaliana] gb|ABD60702.1| At4g00680 [Arabido 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 2.766e-27
N-terminus
sp_v3.0_unigene150549 SustainPine v3.0 422
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin depolymerizing factor, putative 4.267e-08
Putative Complete
sp_v3.0_unigene152645 SustainPine v3.0 424
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene160521 SustainPine v3.0 449
AutoFact: Cofilin n=1 Tax=Yarrowia lipolytica CLIB122 RepID=COFI_YARLI 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene206575 SustainPine v3.0 504
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: sp=Actin-depolymerizing factor 6; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin-depolymerizing factor 6.018e-14
Complete
sp_v3.0_unigene206837 SustainPine v3.0 525
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.737e-24
Complete
sp_v3.0_unigene209324 SustainPine v3.0 621
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1 9.007e-09
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain