Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene360 SustainPine v3.0 1027
• AutoFact: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [Arabidopsis thaliana] gb|AAM14898.1| unknown protein; alternative splicing isoform [Arabidopsis thaliana] dbj|BAD44223.1| unknown protein [Arabidopsis thaliana] gb|AEC10584.1| lysophosp 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene45315 SustainPine v3.0 147
• AutoFact: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [Arabidopsis thaliana] gb|AAM14898.1| unknown protein; alternative splicing isoform [Arabidopsis thaliana] dbj|BAD44223.1| unknown protein [Arabidopsis thaliana] gb|AEC10584.1| lysophosp 1.0e-10
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene56864 SustainPine v3.0 423
• AutoFact: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [Arabidopsis thaliana] gb|AAM14898.1| unknown protein; alternative splicing isoform [Arabidopsis thaliana] dbj|BAD44223.1| unknown protein [Arabidopsis thaliana] gb|AEC10584.1| lysophosp 4.0e-23
• FL-Next: tr=JHL05D22.3 protein; Jatropha curcas. 0.0
• Sma3: Putative uncharacterized protein At2g45670 4.849e-09
Internal
sp_v3.0_unigene97009 SustainPine v3.0 278
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7U7P7_VITVI 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104567 SustainPine v3.0 632
• AutoFact: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [Arabidopsis thaliana] gb|AAM14898.1| unknown protein; alternative splicing isoform [Arabidopsis thaliana] dbj|BAD44223.1| unknown protein [Arabidopsis thaliana] gb|AEC10584.1| lysophosp 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein At2g45670 2.047e-08
Putative N-terminus
sp_v3.0_unigene106999 SustainPine v3.0 164
• AutoFact: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [Arabidopsis thaliana] gb|AAM14898.1| unknown protein; alternative splicing isoform [Arabidopsis thaliana] dbj|BAD44223.1| unknown protein [Arabidopsis thaliana] gb|AEC10584.1| lysophosp 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene121585 SustainPine v3.0 380
• AutoFact: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [Arabidopsis thaliana] gb|AAM14898.1| unknown protein; alternative splicing isoform [Arabidopsis thaliana] dbj|BAD44223.1| unknown protein [Arabidopsis thaliana] gb|AEC10584.1| lysophosp 1.0e-30
• FL-Next: tr=JHL05D22.3 protein; Jatropha curcas. 0.0
• Sma3: Putative uncharacterized protein At2g45670 4.732e-09
Internal
sp_v3.0_unigene162860 SustainPine v3.0 315
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7U7P7_VITVI 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain