Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of nonsense transcripts 1-like protein [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1397 SustainPine v3.0 1096
AutoFact: Nonsense-mediated mRNA decay protein, putative n=2 Tax=Malpighiales RepID=B9SS25_RICCO 0.0
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene3296 SustainPine v3.0 2028
AutoFact: putative type 1 RNA helicase [Oryza sativa Japonica Group] gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptide deformylase 1.11e-15
Putative Complete
sp_v3.0_unigene5351 SustainPine v3.0 4895
AutoFact: putative type 1 RNA helicase [Oryza sativa Japonica Group] gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_11, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene34386 SustainPine v3.0 560
AutoFact: Nonsense-mediated mRNA decay protein, putative n=2 Tax=Malpighiales RepID=B9SS25_RICCO 0.0
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene36675 SustainPine v3.0 792
AutoFact: Nonsense-mediated mRNA decay protein, putative n=2 Tax=Malpighiales RepID=B9SS25_RICCO 8.0e-36
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain