Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: actin 7 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene143731 SustainPine v3.0 1128
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 0.0
C-terminus
sp_v3.0_unigene145806 SustainPine v3.0 442
AutoFact: Actin-like protein (Fragment) n=6 Tax=Magnoliophyta RepID=E5L4N8_ONCHC 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin-2 1.064e-06
Internal
sp_v3.0_unigene146177 SustainPine v3.0 389
AutoFact: Actin (Fragment) n=2 Tax=core eudicotyledons RepID=E3UU95_9ROSI 6.02558e-44
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Misassembled
sp_v3.0_unigene151932 SustainPine v3.0 516
AutoFact: [Z] COG5277 Actin and related proteins 5.0e-28
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 5.067e-16
C-terminus
sp_v3.0_unigene152088 SustainPine v3.0 400
AutoFact: Actin, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LNQ3_9ALVE 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.807e-30
C-terminus
sp_v3.0_unigene152685 SustainPine v3.0 515
AutoFact: Ubiquitin/actin fusion protein 2 n=7 Tax=Eukaryota RepID=Q7XBP8_BIGNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 6.87e-37
C-terminus
sp_v3.0_unigene153713 SustainPine v3.0 443
AutoFact: Actin-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYR6_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin superfamily 4.275e-11
C-terminus
sp_v3.0_unigene165389 SustainPine v3.0 170
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 3.694e-16
Putative C-terminus
sp_v3.0_unigene191058 SustainPine v3.0 309
AutoFact: Actin-17 n=1 Tax=Dictyostelium discoideum RepID=ACT17_DICDI 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.96901e-40
Putative C-terminus
sp_v3.0_unigene191377 SustainPine v3.0 224
AutoFact: Actin, putative n=2 Tax=Sarcocystidae RepID=B9PQT4_TOXGO 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.58e-31
C-terminus
sp_v3.0_unigene195793 SustainPine v3.0 243
AutoFact: Actin domain-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PJ18_9MYCE 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 5 3.851e-08
Internal
sp_v3.0_unigene201810 SustainPine v3.0 315
AutoFact: Actin n=121 Tax=Cryptosporidium RepID=ACT_CRYPV 6.0e-17
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.374e-27
C-terminus
sp_v3.0_unigene202556 SustainPine v3.0 534
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 3.684e-32
C-terminus
sp_v3.0_unigene207797 SustainPine v3.0 528
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 2.031e-37
Putative C-terminus
sp_v3.0_unigene210165 SustainPine v3.0 421
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 0.0
FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Actin 2.274e-22
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain