Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: polyubiquitin 10 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene132889 SustainPine v3.0 228
AutoFact: Ubiquitin [Medicago truncatula] 9.0e-20
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative N-terminus
sp_v3.0_unigene138484 SustainPine v3.0 290
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-33
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.465e-08
N-terminus
sp_v3.0_unigene140957 SustainPine v3.0 580
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.699e-08
Putative Complete
sp_v3.0_unigene147195 SustainPine v3.0 786
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.829e-08
Putative Complete
sp_v3.0_unigene147406 SustainPine v3.0 264
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-29
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 1.737e-07
Putative N-terminus
sp_v3.0_unigene147472 SustainPine v3.0 792
AutoFact: Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 1.531e-10
Putative Complete
sp_v3.0_unigene147504 SustainPine v3.0 529
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene147534 SustainPine v3.0 996
AutoFact: polyubiquitin 4 UBQ4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.649e-08
Putative Complete
sp_v3.0_unigene147546 SustainPine v3.0 636
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.687e-08
Putative Complete
sp_v3.0_unigene147550 SustainPine v3.0 736
AutoFact: putative polyubiquitin (UBQ10) [Arabidopsis thaliana] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.699e-08
Putative N-terminus
sp_v3.0_unigene147559 SustainPine v3.0 350
AutoFact: polyubiquitin [Pinus sylvestris] 7.0e-32
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene147561 SustainPine v3.0 694
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Putative N-terminus
sp_v3.0_unigene147566 SustainPine v3.0 490
AutoFact: Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.674e-08
Putative Complete
sp_v3.0_unigene147575 SustainPine v3.0 329
AutoFact: polyubiquitin [Pinus sylvestris] 3.0e-30
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 4.476e-07
N-terminus
sp_v3.0_unigene147583 SustainPine v3.0 341
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v3.0_unigene147598 SustainPine v3.0 553
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 1.014e-07
Putative Complete
sp_v3.0_unigene147599 SustainPine v3.0 863
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.687e-08
Putative Complete
sp_v3.0_unigene147604 SustainPine v3.0 579
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 2.167e-10
C-terminus
sp_v3.0_unigene147611 SustainPine v3.0 406
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.725e-08
Putative Complete
sp_v3.0_unigene147623 SustainPine v3.0 958
AutoFact: putative polyubiquitin [Arabidopsis thaliana] 0.0
FL-Next: tr=Ubiquitin-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Polyubiquitin 9.799e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain