Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: polyubiquitin 10 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene62916 SustainPine v3.0 282
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-35
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 4.039e-07
Putative N-terminus
sp_v3.0_unigene65533 SustainPine v3.0 197
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-15
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene65575 SustainPine v3.0 160
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 6.0e-13
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.033e-08
Internal
sp_v3.0_unigene65586 SustainPine v3.0 175
AutoFact: polyubiquitin [Pinus sylvestris] 1.0e-17
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene65604 SustainPine v3.0 127
AutoFact: Ubiquitin-60S ribosomal protein L40 n=1 Tax=Trypanosoma cruzi RepID=RL402_TRYCR 3.0e-09
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 3.022e-10
Internal
sp_v3.0_unigene65621 SustainPine v3.0 166
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 9.0e-15
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene65637 SustainPine v3.0 116
AutoFact: Ubiquitin/actin fusion protein 2 n=7 Tax=Eukaryota RepID=Q7XBP8_BIGNA 1.0e-08
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 2 1.015e-07
Internal
sp_v3.0_unigene65734 SustainPine v3.0 166
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 4.0e-14
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v3.0_unigene65787 SustainPine v3.0 230
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 3.0e-19
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.912e-08
N-terminus
sp_v3.0_unigene65829 SustainPine v3.0 162
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 5.0e-13
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 2.163e-10
N-terminus
sp_v3.0_unigene73454 SustainPine v3.0 180
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 1.0e-18
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene74359 SustainPine v3.0 279
AutoFact: PREDICTED: similar to ubiquitin B precursor isoform 2 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0BED 3.0e-26
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 2.143e-10
Putative N-terminus
sp_v3.0_unigene76637 SustainPine v3.0 162
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 7.0e-19
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative Complete
sp_v3.0_unigene95732 SustainPine v3.0 618
AutoFact: ubiquitin precursor [Hevea brasiliensis] 2.0e-24
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Putative pentameric polyubiquitin 5.361e-06
Putative N-terminus
sp_v3.0_unigene124219 SustainPine v3.0 508
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 4.476e-07
Putative Complete
sp_v3.0_unigene126233 SustainPine v3.0 1012
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.687e-08
Complete
sp_v3.0_unigene126890 SustainPine v3.0 1775
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene128575 SustainPine v3.0 238
AutoFact: ubiquitin [Aspergillus clavatus NRRL 1] gb|EAW09700.1| ubiquitin [Aspergillus clavatus NRRL 1] 3.0e-20
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene129674 SustainPine v3.0 439
AutoFact: PREDICTED: similar to ubiquitin B precursor isoform 2 [Canis familiaris] 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin, putative 4.441e-07
Putative N-terminus
sp_v3.0_unigene132695 SustainPine v3.0 275
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-30
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain