Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: light-harvesting complex II chlorophyll a/b binding protein 1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene146255 SustainPine v3.0 290
AutoFact: Type I chlorophyll a/b-binding protein b (Fragment) n=10 Tax=core eudicotyledons RepID=Q9AVF0_AMATR 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.489e-16
N-terminus
sp_v3.0_unigene146345 SustainPine v3.0 452
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 2.89e-26
Putative C-terminus
sp_v3.0_unigene146429 SustainPine v3.0 426
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.239e-26
Internal
sp_v3.0_unigene146464 SustainPine v3.0 453
AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 6.0e-35
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: LHCP 3.794e-21
Internal
sp_v3.0_unigene146485 SustainPine v3.0 506
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.265e-38
Internal
sp_v3.0_unigene157302 SustainPine v3.0 242
AutoFact: Light-harvesting protein of photosystem I n=4 Tax=Chlamydomonadales RepID=D8UIW8_VOLCA 2.0e-16
FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Sma3: LHCP 7.021e-25
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain